From 00643d400364ffa28ce361fad82b6a3d37b4e5c1 Mon Sep 17 00:00:00 2001
From: s181706 <jonathan.gesell@utsouthwestern.edu>
Date: Tue, 11 Feb 2020 15:15:07 -0600
Subject: [PATCH] Corrected path for hisat2 with new directory names
---
workflow/rna-seq.nf | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 06e867c..98b05ad 100755
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -6,8 +6,8 @@ params.bdbag = "${baseDir}/../test_data/auth/cookies.txt"
//params.repRID = "16-1ZX4"
params.repRID = "Q-Y5JA"
params.refVersion = "0.0.1"
-params.refMuVersion = "38.P6"
-params.refHuVersion = "38.p12"
+params.refMuVersion = "38.P6.vM22"
+params.refHuVersion = "38.p12.v31"
params.outDir = "${baseDir}/../output"
// Parse input variables
--
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