Commit e1cdf7c6 authored by Venkat Malladi's avatar Venkat Malladi
Browse files

Update location of nf file.

parent 9654e9e1
......@@ -51,7 +51,7 @@ main(){
# run pipeline on replicate RIDs in parallel
echo ${rid}
nextflow -q run workflow/rna-seq.nf --repRID ${rid} --source dev --deriva /project/BICF/BICF_Core/shared/gudmap/test_data/auth/credential.json --bdbag /project/BICF/BICF_Core/shared/gudmap/test_data/auth/cookies.txt --dev false --upload true --track true --email ${email} -with-report ./output/${rid}_report.html -with-timeline ./output/${rid}_timeline.html
nextflow -q run rna-seq.nf --repRID ${rid} --source dev --deriva /project/BICF/BICF_Core/shared/gudmap/test_data/auth/credential.json --bdbag /project/BICF/BICF_Core/shared/gudmap/test_data/auth/cookies.txt --dev false --upload true --track true --email ${email} -with-report ./output/${rid}_report.html -with-timeline ./output/${rid}_timeline.html
}
......
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