Merge requests · Astrocyte

Aws test

sra_pipeline!42 · created Oct 08, 2019 by Jonathan Gesell AWS Functionality
Updates testing
updated Oct 09, 2019
WIP: Aws

sra_pipeline!41 · created Oct 08, 2019 by Jonathan Gesell AWS Functionality
Updates testing
- Closed
updated Oct 08, 2019
Updated to bicfbase:1.3

sra_pipeline!40 · created Oct 01, 2019 by Jonathan Gesell
Updates
updated Oct 01, 2019
Updated to most recent images

sra_pipeline!39 · created Oct 01, 2019 by Jonathan Gesell
Updates
- Closed
updated Oct 01, 2019
Resolve "Update to bicfbase:1.1"

sra_pipeline!38 · created Oct 01, 2019 by Jonathan Gesell
Updates
- Closed
updated Oct 01, 2019
Update paired-end diff to skip this test. 3 of 3 checklist items completed

chipseq_analysis!60 · created Sep 16, 2019 by Venkat Malladi 1.1.1 master
bug
updated Sep 17, 2019
WIP: Resolve "Testing fails on new update"

chipseq_analysis!59 · created Sep 16, 2019 by Venkat Malladi 1.1.1 master
bug
- Closed
updated Sep 16, 2019
Updated checkDesignFile for Astrocyte functionality.

sra_pipeline!37 · created Sep 11, 2019 by Jonathan Gesell Astrocyte Functionality
Bug fixes
updated Sep 11, 2019
Resolve "Update to bicfbase:1.1"

sra_pipeline!36 · created Sep 10, 2019 by Jonathan Gesell Astrocyte Functionality
Updates error correction
updated Sep 10, 2019
Resolve "Design file - filename with spaces error"

cellranger_mkfastq!53 · created Aug 29, 2019 by Jeremy Mathews v2.1.5
bug confirmed
updated Sep 03, 2019
Remove spaces from design file

cellranger_mkfastq!52 · created Aug 29, 2019 by Jeremy Mathews v2.1.5
bug confirmed
- Closed
updated Aug 29, 2019
Corrected check design to output an explanation per error.

sra_pipeline!35 · created Aug 28, 2019 by Jonathan Gesell Astrocyte Functionality
Bug fixes
updated Aug 28, 2019
Vizapp

cellranger_mkfastq!51 · created Aug 27, 2019 by Jeremy Mathews
- Closed
updated Aug 27, 2019
Vizapp

cellranger_mkfastq!50 · created Aug 27, 2019 by Gervaise Henry
updated Aug 27, 2019
Revert to origional vizapp

cellranger_mkfastq!49 · created Aug 27, 2019 by Gervaise Henry
- Closed
updated Aug 27, 2019
Split app.R into server and UI

cellranger_mkfastq!48 · created Aug 27, 2019 by Jeremy Mathews
updated Aug 27, 2019
Add Vizapp of multiqc results

cellranger_mkfastq!47 · created Aug 27, 2019 by Jeremy Mathews
updated Aug 27, 2019
add in error strategy

rnaseq!8 · created Aug 27, 2019 by Jeremy Mathews
updated Aug 28, 2019
Resolve "xcor.py, --random-source fails if file is too small" 3 of 3 checklist items completed

chipseq_analysis!58 · created Aug 27, 2019 by Jeremy Mathews 1.1.1 master
- Merged
- 6
updated Sep 12, 2019
Check Design for SRP/ERP/DRP and remove return carriage

sra_pipeline!34 · created Aug 16, 2019 by Jeremy Mathews
updated Aug 16, 2019