Issues · Astrocyte

Install methylation

methylation_analysis#1 · opened Jun 12, 2020 by Venkat Malladi 1.0.0
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updated Dec 29, 2020
Update DOI for Methylation pipeline

methylation_analysis#4 · opened Jul 11, 2020 by Venkat Malladi 1.0.0
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updated Dec 29, 2020
Add license.

methylation_analysis#6 · opened Jul 17, 2020 by Venkat Malladi 1.0.0
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updated Dec 29, 2020
Fix README

sra_pipeline#28 · opened Nov 24, 2020 by Jeremy Mathews
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updated Nov 25, 2020
Add 5GEXPE/SE as library options

cellranger_count#56 · opened Nov 20, 2020 by Gervaise Henry 3.0.0 Doing critical
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updated Nov 20, 2020
Azure Compatability

sra_pipeline#8 · opened Sep 09, 2019 by Jonathan Gesell Azure Functionality testing
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updated Aug 27, 2020
Version Zenodo

cellranger_count#51 · opened Aug 14, 2020 by Gervaise Henry 2.2.0
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updated Aug 15, 2020
Update doi in Readme

sra_pipeline#23 · opened Jun 17, 2020 by Venkat Malladi
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updated Aug 15, 2020
Add Jon to author list 1 of 2 tasks completed

cellranger_count#47 · opened Jun 22, 2020 by Gervaise Henry 2.2.0
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updated Aug 14, 2020
Generate Raw RDS file

cellranger_count#50 · opened Jul 31, 2020 by Venkat Malladi 2.2.0 Doing enhancement
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updated Aug 14, 2020
Annotation file is missing data

chipseq_analysis#87 · opened Jul 06, 2020 by Venkat Malladi 2.0.0 bug
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updated Aug 07, 2020
map reads fails to make bam files for long reads

atacseq_analysis#43 · opened Jul 28, 2020 by Venkat Malladi bug critical
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updated Jul 29, 2020
Update to astrocyte 0.3.1

atacseq_analysis#42 · opened Jun 26, 2020 by Venkat Malladi Version 2.1.0
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updated Jul 01, 2020
Update to astrocyte 0.3.1

chipseq_analysis#86 · opened Jun 26, 2020 by Venkat Malladi 2.0.0
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updated Jul 01, 2020
Track chip-seq usage

chipseq_analysis#84 · opened Jun 19, 2020 by Venkat Malladi
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updated Jul 01, 2020
Astrocyte fixes

atacseq_analysis#40 · opened Jun 19, 2020 by Venkat Malladi
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updated Jun 21, 2020
Add base mask

cellranger_mkfastq#39 · opened Mar 20, 2020 by Gervaise Henry v2.1.5 Doing enhancement
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updated Jun 20, 2020
Ignore dual index

cellranger_mkfastq#38 · opened Mar 19, 2020 by Gervaise Henry v2.1.5 Doing critical enhancement
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- 1
updated Jun 20, 2020
Add ulimit to cellranger process

cellranger_mkfastq#37 · opened Feb 21, 2020 by Gervaise Henry v2.1.5 Doing bug confirmed critical
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updated Jun 20, 2020
Tests for astrocyte

atacseq_analysis#39 · opened Jun 11, 2020 by Venkat Malladi
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updated Jun 18, 2020