Issues · Astrocyte

Paired-end Diffbind peaks gives different answer

chipseq_analysis#78 · opened Mar 25, 2020 by Venkat Malladi 1.1.0 Test bug
- CLOSED
- 1
- 0
updated Apr 20, 2020
Add in Fastqc

chipseq_analysis#1 · opened Aug 30, 2017 by Venkat Malladi rejected
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- 1
- 1
updated Apr 16, 2020
Config Lock git

chipseq_analysis#81 · opened Mar 30, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
updated Apr 16, 2020
Gitlab CI overridding concurrent pipelines

chipseq_analysis#80 · opened Mar 28, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
- 5
updated Apr 16, 2020
Fix sigbus error

chipseq_analysis#79 · opened Mar 28, 2020 by Venkat Malladi bug critical
- CLOSED
- 1
- 2
updated Apr 16, 2020
Containerize

cellranger_count#41 · opened Apr 13, 2020 by Gervaise Henry v2.1.1 Doing enhancement
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- 1
- 2
updated Apr 15, 2020
Update params to current standards

cellranger_count#42 · opened Apr 13, 2020 by Gervaise Henry v2.1.1 Doing enhancement
- CLOSED
- 1
- 0
updated Apr 15, 2020
Remove unnecessary files from output

cellranger_count#43 · opened Apr 13, 2020 by Gervaise Henry v2.1.1 Doing enhancement
- CLOSED
- 0
updated Apr 14, 2020
Add 3':5' param

cellranger_count#38 · opened Dec 05, 2019 by Gervaise Henry v2.1.1 Doing critical enhancement
- CLOSED
- 1
- 0
updated Apr 14, 2020
Disk quota exceeded

chipseq_analysis#82 · opened Mar 31, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
updated Apr 13, 2020
MultiConfig

sra_pipeline#11 · opened Dec 03, 2019 by Jeremy Mathews
- CLOSED
- 1
updated Apr 04, 2020
Add percent of reads - mitochondria

atacseq_analysis#28 · opened Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Mar 24, 2020
Single Rep Pool and Pseudo

chipseq_analysis#73 · opened Jan 07, 2020 by Venkat Malladi 1.1.1 Test bug
- CLOSED
- 1
- 0
updated Mar 24, 2020
Update to Astrocyte 0.2.0

chipseq_analysis#77 · opened Mar 15, 2020 by Venkat Malladi 1.1.0 Test
- CLOSED
- 1
- 0
updated Mar 21, 2020
hg37 annotate peaks fails

chipseq_analysis#71 · opened Jan 02, 2020 by Holly Ruess 1.1.0 To Do rejected
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- 1
updated Mar 20, 2020
annotate peaks

chipseq_analysis#47 · opened May 13, 2019 by Holly Ruess 1.1.0 enhancement
- CLOSED
- 1
- 0
updated Mar 20, 2020
Move to use Process scripts

chipseq_analysis#17 · opened May 08, 2018 by Venkat Malladi enhancement rejected
- CLOSED
- 1
updated Mar 20, 2020
callPeaksMACS exits when data is bad

chipseq_analysis#26 · opened Jan 15, 2019 by Holly Ruess 1.1.0 bug
- CLOSED
- 1
- 3
updated Mar 15, 2020
add plotProfile

chipseq_analysis#29 · opened Jan 23, 2019 by Holly Ruess 1.1.0 enhancement
- CLOSED
- 1
- 0
updated Mar 15, 2020
xcor.py, --random-source fails if file is too small

chipseq_analysis#30 · opened Feb 12, 2019 by Holly Ruess 1.1.0
- CLOSED
- 1
- 0
updated Mar 15, 2020