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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

5GEX QC data not present in multiqc report

BICF/Astrocyte/cellranger_count#54 · created Nov 04, 2020 by Gervaise Henry 3.0.0 To Do bug confirmed
- 0
updated Nov 04, 2020
Add 3':5' param

BICF/Astrocyte/cellranger_count#38 · created Dec 05, 2019 by Gervaise Henry v2.1.1 Doing critical enhancement
- CLOSED
- 1
- 0
updated Apr 14, 2020
Add 5GEXPE/SE as library options

BICF/Astrocyte/cellranger_count#56 · created Nov 20, 2020 by Gervaise Henry 3.0.0 Doing critical
- CLOSED
- 2
- 0
updated Nov 20, 2020
Add ability to count additional features

BICF/Astrocyte/cellranger_count#10 · created Mar 04, 2019 by Gervaise Henry Pending To Do enhancement
- 0
updated Jun 21, 2020
Add ability to handle dual index

BICF/Astrocyte/cellranger_mkfastq#44 · created Oct 30, 2020 by Gervaise Henry Pending To Do critical enhancement
- 4
updated Nov 03, 2020
Add a changelog

BICF/Astrocyte/methylation_analysis#3 · created Jul 11, 2020 by Venkat Malladi 1.0.0
- 0
updated Dec 29, 2020
Add Addtional ORCID

onboarding#7 · created Jul 29, 2019 by Venkat Malladi
- CLOSED
- 1
- 0
updated Aug 02, 2019
Add Astrocyte documentation

BICF/Astrocyte/cellranger_count#15 · created Mar 11, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) documentation
- CLOSED
- 1
- 0
updated Mar 24, 2019
Add back tags per process

BICF/Astrocyte/methylation_analysis#5 · created Jul 11, 2020 by Venkat Malladi 1.0.0
- 0
updated Dec 29, 2020
Add badges

BICF/Astrocyte/sra_pipeline#21 · created Jun 02, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Jun 17, 2020
Add base mask

BICF/Astrocyte/cellranger_mkfastq#39 · created Mar 20, 2020 by Gervaise Henry v2.1.5 Doing enhancement
- CLOSED
- 1
- 2
updated Jun 20, 2020
Add cellranger 3.0.2 as option

BICF/Astrocyte/cellranger_count#8 · created Mar 04, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 1
updated Mar 04, 2019
Add cellranger 5.0.0

BICF/Astrocyte/cellranger_count#55 · created Nov 20, 2020 by Gervaise Henry 3.0.0 To Do support
- 0
updated Nov 20, 2020
Add cellranger references version 3.0.0 as options

BICF/Astrocyte/cellranger_count#9 · created Mar 04, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Mar 05, 2019
Add cellranger v3.0.1

BICF/Astrocyte/cellranger_count#1 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 0
updated Feb 07, 2019
Add cellranger v 3.1.0 5 of 5 tasks completed

BICF/Astrocyte/cellranger_count#30 · created Jul 30, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 1
- 0
updated Jul 31, 2019
add checks to checkDesign process

BICF/Astrocyte/cellranger_mkfastq#34 · created Sep 11, 2019 by Spencer Barnes v2.1.5 bug enhancement
- CLOSED
- 1
- 2
updated Nov 07, 2019
add checks to determine if fastq files are in proper format and not truncated

BICF/Astrocyte/chipseq_analysis#69 · created Oct 30, 2019 by Spencer Barnes 2.0.0 To Do
- 0
updated Jun 23, 2020
Add CI

BICF/Astrocyte/variant_germline#1 · created May 31, 2019 by Jeremy Mathews
- CLOSED
- 1
- 0
updated Jun 18, 2019
Add concatination flag

BICF/Astrocyte/sra_pipeline#19 · created Apr 30, 2020 by Jonathan Gesell Astrocyte Functionality Bug fixes Doing
- 0
updated Apr 30, 2020

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