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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Version Zenodo

BICF/Astrocyte/cellranger_count#51 · created Aug 14, 2020 by Gervaise Henry 2.2.0
- CLOSED
- 0
updated Aug 15, 2020
Add Jon to author list 1 of 2 tasks completed

BICF/Astrocyte/cellranger_count#47 · created Jun 22, 2020 by Gervaise Henry 2.2.0
- CLOSED
- 1
updated Aug 14, 2020
Add in Fastqc

BICF/Astrocyte/chipseq_analysis#1 · created Aug 30, 2017 by Venkat Malladi rejected
- CLOSED
- 1
- 1
updated Apr 16, 2020
star broken

BICF/Astrocyte/rnaseq#1 · created Apr 03, 2018 by Spencer Barnes
- CLOSED
- 3
updated Apr 30, 2018
map_reads failure case

BICF/Astrocyte/atacseq_analysis#1 · created Apr 12, 2018 by Spencer Barnes Version 2.1.0 bug
- 0
updated Jun 23, 2020
Add cellranger v3.0.1

BICF/Astrocyte/cellranger_count#1 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 0
updated Feb 07, 2019
Migrate cellranger_count basics

BICF/Astrocyte/cellranger_mkfastq#1 · created Mar 24, 2019 by Gervaise Henry enhancement
- CLOSED
- 0
updated Mar 28, 2019
RNAseq-ProcessScripts

onboarding#1 · created Apr 26, 2019 by Holly Ruess
- CLOSED
- 1
- 0
updated Apr 26, 2019
Add testing scripts

BICF/Astrocyte/sra_pipeline#1 · created May 03, 2019 by Jonathan Gesell testing
- CLOSED
- 1
- 0
updated May 03, 2019
blank page on survival plot download

BICF/Astrocyte/tcga_shiny#1 · created May 20, 2019 by Spencer Barnes 1.0.1 bug
- CLOSED
- 1
- 2
updated May 22, 2019
Add CI

BICF/Astrocyte/variant_germline#1 · created May 31, 2019 by Jeremy Mathews
- CLOSED
- 1
- 0
updated Jun 18, 2019
Radiation Table

BICF/KCE/kce_etl#1 · created Jul 09, 2019 by Venkat Malladi
- CLOSED
- 1
- 0
updated Dec 12, 2019
Install methylation

BICF/Astrocyte/methylation_analysis#1 · created Jun 12, 2020 by Venkat Malladi 1.0.0
- CLOSED
- 1
- 0
updated Dec 29, 2020
Update test data

BICF/Astrocyte/chipseq_analysis#2 · created Sep 28, 2017 by Venkat Malladi enhancement
- CLOSED
- 1
updated May 20, 2019
RNASeq New Isoform Detection

BICF/Astrocyte/rnaseq#2 · created Apr 10, 2018 by Brandi Cantarel
- CLOSED
- 0
updated Apr 13, 2021
deeptools version 3 error

BICF/Astrocyte/atacseq_analysis#2 · created May 11, 2018 by Spencer Barnes Version 2.0 enhancment
- CLOSED
- 1
updated Jan 02, 2020
Remove reference genome full folder

BICF/Astrocyte/cellranger_count#2 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 1
updated Apr 27, 2019
Optimize mkfastq

BICF/Astrocyte/cellranger_mkfastq#2 · created Mar 24, 2019 by Gervaise Henry enhancement
- CLOSED
- 0
updated Apr 05, 2019
Document Backups

onboarding#2 · created Apr 26, 2019 by Venkat Malladi
- CLOSED
- 1
- 0
updated Apr 26, 2019
Add in Astrocyte Support

BICF/Astrocyte/sra_pipeline#2 · created May 03, 2019 by Venkat Malladi
- CLOSED
- 4
- 0
updated May 29, 2019

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