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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Add params from biohpc.config into main.nf

BICF/Astrocyte/cellranger_count#13 · created Mar 07, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) bug
- CLOSED
- 1
- 2
updated Mar 22, 2019
Fix design file overwrite

BICF/Astrocyte/cellranger_count#6 · created Feb 07, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) bug
- CLOSED
- 0
updated Mar 05, 2019
Update Documentation

BICF/Astrocyte/cellranger_count#17 · created Mar 24, 2019 by Venkat Malladi Put on Astrocyte Production (1.0.0) documentation
- CLOSED
- 1
- 1
updated Mar 25, 2019
Add Astrocyte documentation

BICF/Astrocyte/cellranger_count#15 · created Mar 11, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) documentation
- CLOSED
- 1
- 0
updated Mar 24, 2019
Make param.genomeLocation have full path

BICF/Astrocyte/cellranger_count#12 · created Mar 07, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 0
updated Mar 10, 2019
Add parameter for 10x kit version

BICF/Astrocyte/cellranger_count#11 · created Mar 04, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Mar 05, 2019
Add cellranger references version 3.0.0 as options

BICF/Astrocyte/cellranger_count#9 · created Mar 04, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Mar 05, 2019
Add cellranger 3.0.2 as option

BICF/Astrocyte/cellranger_count#8 · created Mar 04, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 1
updated Mar 04, 2019
Fix config file

BICF/Astrocyte/cellranger_count#7 · created Feb 15, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Mar 05, 2019
Create output directory option

BICF/Astrocyte/cellranger_count#4 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Apr 27, 2019
Make instructions

BICF/Astrocyte/cellranger_count#3 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) documentation
- CLOSED
- 1
- 0
updated Apr 27, 2019
Remove reference genome full folder

BICF/Astrocyte/cellranger_count#2 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 1
updated Apr 27, 2019
Add cellranger v3.0.1

BICF/Astrocyte/cellranger_count#1 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 0
updated Feb 07, 2019
Add concatination flag

BICF/Astrocyte/sra_pipeline#19 · created Apr 30, 2020 by Jonathan Gesell Astrocyte Functionality Bug fixes Doing
- 0
updated Apr 30, 2020
Containerize Pipeline

BICF/Astrocyte/sra_pipeline#24 · created Jun 17, 2020 by Jonathan Gesell Azure Functionality Doing Updates testing
- 0
updated Jun 17, 2020
Azure Compatability

BICF/Astrocyte/sra_pipeline#8 · created Sep 09, 2019 by Jonathan Gesell Azure Functionality testing
- CLOSED
- 1
updated Aug 27, 2020
Update nf-tower token

BICF/Astrocyte/chipseq_analysis#91 · created Jul 25, 2021 by Venkat Malladi 2.0.0 critical
- 1
- 0
updated Jul 25, 2021
Strip spaces in design file

BICF/Astrocyte/chipseq_analysis#90 · created Oct 20, 2020 by Venkat Malladi 2.0.0 bug
- 0
updated Dec 29, 2020
Diffbind is tsv not csv

BICF/Astrocyte/chipseq_analysis#89 · created Sep 07, 2020 by Venkat Malladi 2.0.0 bug
- 0
updated Dec 29, 2020
Add license.

BICF/Astrocyte/methylation_analysis#6 · created Jul 17, 2020 by Venkat Malladi 1.0.0
- CLOSED
- 1
- 0
updated Dec 29, 2020

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