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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Add concatination flag

BICF/Astrocyte/sra_pipeline#19 · created Apr 30, 2020 by Jonathan Gesell Astrocyte Functionality Bug fixes Doing
- 0
updated Apr 30, 2020
Containerize Pipeline

BICF/Astrocyte/sra_pipeline#24 · created Jun 17, 2020 by Jonathan Gesell Azure Functionality Doing Updates testing
- 0
updated Jun 17, 2020
Update nf-tower token

BICF/Astrocyte/chipseq_analysis#91 · created Jul 25, 2021 by Venkat Malladi 2.0.0 critical
- 1
- 0
updated Jul 25, 2021
Strip spaces in design file

BICF/Astrocyte/chipseq_analysis#90 · created Oct 20, 2020 by Venkat Malladi 2.0.0 bug
- 0
updated Dec 29, 2020
Diffbind is tsv not csv

BICF/Astrocyte/chipseq_analysis#89 · created Sep 07, 2020 by Venkat Malladi 2.0.0 bug
- 0
updated Dec 29, 2020
Add back tags per process

BICF/Astrocyte/methylation_analysis#5 · created Jul 11, 2020 by Venkat Malladi 1.0.0
- 0
updated Dec 29, 2020
Add a changelog

BICF/Astrocyte/methylation_analysis#3 · created Jul 11, 2020 by Venkat Malladi 1.0.0
- 0
updated Dec 29, 2020
Update Readme

BICF/Astrocyte/methylation_analysis#2 · created Jul 11, 2020 by Venkat Malladi 1.0.0
- 0
updated Dec 29, 2020
Update multiqc version/references report

BICF/Astrocyte/atacseq_analysis#41 · created Jun 23, 2020 by Gervaise Henry Version 2.1.0 documentation enhancment
- 1
- 0
updated Jul 01, 2020
Update multiqc version/references report

BICF/Astrocyte/chipseq_analysis#85 · created Jun 23, 2020 by Gervaise Henry 2.0.0 To Do documentation enhancement
- 0
updated Jun 23, 2020
Unique Experiment check

BICF/Astrocyte/chipseq_analysis#83 · created May 24, 2020 by Venkat Malladi 2.0.0
- 0
updated Jun 23, 2020
update version of nextflow

BICF/Astrocyte/atacseq_analysis#36 · created Feb 26, 2020 by Holly Ruess Version 2.1.0 critical enhancment
- 0
updated Jun 23, 2020
Annotepeaks

BICF/Astrocyte/chipseq_analysis#74 · created Feb 03, 2020 by Venkat Malladi 2.0.0 Doing enhancement
- 1
updated Jun 23, 2020
Change to 256 only if job fails

BICF/Astrocyte/atacseq_analysis#35 · created Jan 09, 2020 by Holly Ruess Version 2.1.0 enhancment
- 0
updated Jun 23, 2020
Diff Peak analysis

BICF/Astrocyte/atacseq_analysis#34 · created Jan 09, 2020 by Holly Ruess Version 2.1.0 enhancment
- 0
updated Jun 23, 2020
Motif search in peaks

BICF/Astrocyte/atacseq_analysis#33 · created Jan 09, 2020 by Holly Ruess Version 2.1.0 enhancment
- 0
updated Jun 23, 2020
Use specific meme file in motif search

BICF/Astrocyte/chipseq_analysis#70 · created Dec 13, 2019 by Holly Ruess 2.0.0 To Do enhancement
- 0
updated Dec 29, 2020
add checks to determine if fastq files are in proper format and not truncated

BICF/Astrocyte/chipseq_analysis#69 · created Oct 30, 2019 by Spencer Barnes 2.0.0 To Do
- 0
updated Jun 23, 2020
Annotate Diffbind output

BICF/Astrocyte/chipseq_analysis#63 · created Aug 25, 2019 by Holly Ruess 2.0.0 To Do enhancement
- 0
updated Dec 29, 2020
Filter reads increase memory

BICF/Astrocyte/chipseq_analysis#62 · created Jul 31, 2019 by Venkat Malladi 2.0.0 bug discussion
- 1
updated Dec 29, 2020

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