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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Update Documentation

BICF/Astrocyte/cellranger_count#17 · created Mar 24, 2019 by Venkat Malladi Put on Astrocyte Production (1.0.0) documentation
- CLOSED
- 1
- 1
updated Mar 25, 2019
Add Astrocyte documentation

BICF/Astrocyte/cellranger_count#15 · created Mar 11, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) documentation
- CLOSED
- 1
- 0
updated Mar 24, 2019
Add params from biohpc.config into main.nf

BICF/Astrocyte/cellranger_count#13 · created Mar 07, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) bug
- CLOSED
- 1
- 2
updated Mar 22, 2019
Make param.genomeLocation have full path

BICF/Astrocyte/cellranger_count#12 · created Mar 07, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 0
updated Mar 10, 2019
Add parameter for 10x kit version

BICF/Astrocyte/cellranger_count#11 · created Mar 04, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Mar 05, 2019
Add cellranger references version 3.0.0 as options

BICF/Astrocyte/cellranger_count#9 · created Mar 04, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Mar 05, 2019
Add cellranger 3.0.2 as option

BICF/Astrocyte/cellranger_count#8 · created Mar 04, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 1
updated Mar 04, 2019
Fix config file

BICF/Astrocyte/cellranger_count#7 · created Feb 15, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Mar 05, 2019
Fix design file overwrite

BICF/Astrocyte/cellranger_count#6 · created Feb 07, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) bug
- CLOSED
- 0
updated Mar 05, 2019
Create output directory option

BICF/Astrocyte/cellranger_count#4 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Apr 27, 2019
Make instructions

BICF/Astrocyte/cellranger_count#3 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) documentation
- CLOSED
- 1
- 0
updated Apr 27, 2019
Remove reference genome full folder

BICF/Astrocyte/cellranger_count#2 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 1
updated Apr 27, 2019
Add cellranger v3.0.1

BICF/Astrocyte/cellranger_count#1 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 0
updated Feb 07, 2019
Azure Compatability

BICF/Astrocyte/sra_pipeline#8 · created Sep 09, 2019 by Jonathan Gesell Azure Functionality testing
- CLOSED
- 1
updated Aug 27, 2020
Add license.

BICF/Astrocyte/methylation_analysis#6 · created Jul 17, 2020 by Venkat Malladi 1.0.0
- CLOSED
- 1
- 0
updated Dec 29, 2020
Update DOI for Methylation pipeline

BICF/Astrocyte/methylation_analysis#4 · created Jul 11, 2020 by Venkat Malladi 1.0.0
- CLOSED
- 1
- 0
updated Dec 29, 2020
Annotation file is missing data

BICF/Astrocyte/chipseq_analysis#87 · created Jul 06, 2020 by Venkat Malladi 2.0.0 bug
- CLOSED
- 1
- 0
updated Aug 07, 2020
Update to astrocyte 0.3.1

BICF/Astrocyte/atacseq_analysis#42 · created Jun 26, 2020 by Venkat Malladi Version 2.1.0
- CLOSED
- 0
updated Jul 01, 2020
Update to astrocyte 0.3.1

BICF/Astrocyte/chipseq_analysis#86 · created Jun 26, 2020 by Venkat Malladi 2.0.0
- CLOSED
- 0
updated Jul 01, 2020
Install methylation

BICF/Astrocyte/methylation_analysis#1 · created Jun 12, 2020 by Venkat Malladi 1.0.0
- CLOSED
- 1
- 0
updated Dec 29, 2020

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