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  • BICF
  • Issues

  • Open 76
  • Closed 273
  • All 349
  • Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking
  • Update Documentation
    BICF/Astrocyte/cellranger_count#17 · created Mar 24, 2019 by Venkat Malladi   Put on Astrocyte Production (1.0.0)   documentation
    • CLOSED
    • 1
    • 1
    updated Mar 25, 2019
  • Add Astrocyte documentation
    BICF/Astrocyte/cellranger_count#15 · created Mar 11, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   documentation
    • CLOSED
    • 1
    • 0
    updated Mar 24, 2019
  • Add params from biohpc.config into main.nf
    BICF/Astrocyte/cellranger_count#13 · created Mar 07, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   bug
    • CLOSED
    • 1
    • 2
    updated Mar 22, 2019
  • Make param.genomeLocation have full path
    BICF/Astrocyte/cellranger_count#12 · created Mar 07, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   enhancement
    • CLOSED
    • 2
    • 0
    updated Mar 10, 2019
  • Add parameter for 10x kit version
    BICF/Astrocyte/cellranger_count#11 · created Mar 04, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   enhancement
    • CLOSED
    • 1
    • 0
    updated Mar 05, 2019
  • Add cellranger references version 3.0.0 as options
    BICF/Astrocyte/cellranger_count#9 · created Mar 04, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   enhancement
    • CLOSED
    • 1
    • 0
    updated Mar 05, 2019
  • Add cellranger 3.0.2 as option
    BICF/Astrocyte/cellranger_count#8 · created Mar 04, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   enhancement
    • CLOSED
    • 2
    • 1
    updated Mar 04, 2019
  • Fix config file
    BICF/Astrocyte/cellranger_count#7 · created Feb 15, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   enhancement
    • CLOSED
    • 1
    • 0
    updated Mar 05, 2019
  • Fix design file overwrite
    BICF/Astrocyte/cellranger_count#6 · created Feb 07, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   bug
    • CLOSED
    • 0
    updated Mar 05, 2019
  • Create output directory option
    BICF/Astrocyte/cellranger_count#4 · created Feb 06, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   enhancement
    • CLOSED
    • 1
    • 0
    updated Apr 27, 2019
  • Make instructions
    BICF/Astrocyte/cellranger_count#3 · created Feb 06, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   documentation
    • CLOSED
    • 1
    • 0
    updated Apr 27, 2019
  • Remove reference genome full folder
    BICF/Astrocyte/cellranger_count#2 · created Feb 06, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   enhancement
    • CLOSED
    • 2
    • 1
    updated Apr 27, 2019
  • Add cellranger v3.0.1
    BICF/Astrocyte/cellranger_count#1 · created Feb 06, 2019 by Gervaise Henry   Put on Astrocyte Production (1.0.0)   enhancement
    • CLOSED
    • 2
    • 0
    updated Feb 07, 2019
  • Add concatination flag
    BICF/Astrocyte/sra_pipeline#19 · created Apr 30, 2020 by Jonathan Gesell   Astrocyte Functionality   Bug fixes Doing
    • 0
    updated Apr 30, 2020
  • Containerize Pipeline
    BICF/Astrocyte/sra_pipeline#24 · created Jun 17, 2020 by Jonathan Gesell   Azure Functionality   Doing Updates testing
    • 0
    updated Jun 17, 2020
  • Azure Compatability
    BICF/Astrocyte/sra_pipeline#8 · created Sep 09, 2019 by Jonathan Gesell   Azure Functionality   testing
    • CLOSED
    • 1
    updated Aug 27, 2020
  • Update nf-tower token
    BICF/Astrocyte/chipseq_analysis#91 · created Jul 25, 2021 by Venkat Malladi   2.0.0   critical
    • 1
    • 0
    updated Jul 25, 2021
  • Strip spaces in design file
    BICF/Astrocyte/chipseq_analysis#90 · created Oct 20, 2020 by Venkat Malladi   2.0.0   bug
    • 0
    updated Dec 29, 2020
  • Diffbind is tsv not csv
    BICF/Astrocyte/chipseq_analysis#89 · created Sep 07, 2020 by Venkat Malladi   2.0.0   bug
    • 0
    updated Dec 29, 2020
  • Add license.
    BICF/Astrocyte/methylation_analysis#6 · created Jul 17, 2020 by Venkat Malladi   1.0.0
    • CLOSED
    • 1
    • 0
    updated Dec 29, 2020
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