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  • BICF
  • Issues

  • Open 76
  • Closed 273
  • All 349
  • Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking
  • Make tagAlign files
    BICF/Astrocyte/chipseq_analysis#12 · created Oct 18, 2017 by Venkat Malladi   1.0.0   enhancement
    • CLOSED
    • 1
    • 0
    updated Oct 23, 2017
  • Remove qc_fastq.py
    BICF/Astrocyte/chipseq_analysis#11 · created Oct 17, 2017 by Venkat Malladi   1.0.0   bug
    • CLOSED
    • 1
    • 0
    updated Oct 18, 2017
  • Add in grouping variable
    BICF/Astrocyte/chipseq_analysis#10 · created Oct 11, 2017 by Venkat Malladi   1.0.0   bug
    • CLOSED
    • 1
    • 0
    updated Oct 11, 2017
  • Update documentation
    BICF/Astrocyte/chipseq_analysis#8 · created Oct 11, 2017 by Venkat Malladi   1.0.0   documentation enhancement
    • CLOSED
    • 2
    • 0
    updated May 06, 2019
  • Add in Macs2 support
    BICF/Astrocyte/chipseq_analysis#7 · created Oct 11, 2017 by Venkat Malladi   1.0.0   enhancement
    • CLOSED
    • 1
    • 0
    updated Nov 20, 2017
  • Update deeptools
    BICF/Astrocyte/chipseq_analysis#6 · created Oct 11, 2017 by Venkat Malladi   1.0.0   bug enhancement
    • CLOSED
    • 1
    • 0
    updated Oct 18, 2017
  • Include Phantompeakqualtools step
    BICF/Astrocyte/chipseq_analysis#5 · created Oct 11, 2017 by Venkat Malladi   1.0.0   enhancement
    • CLOSED
    • 1
    • 1
    updated Oct 24, 2017
  • Bam Stats and Filter
    BICF/Astrocyte/chipseq_analysis#4 · created Oct 09, 2017 by Venkat Malladi   1.0.0   enhancement
    • CLOSED
    • 1
    • 0
    updated Oct 11, 2017
  • Add mapping and trimming
    BICF/Astrocyte/chipseq_analysis#3 · created Sep 30, 2017 by Venkat Malladi   1.0.0   enhancement
    • CLOSED
    • 1
    • 0
    updated Oct 11, 2017
  • Vm's
    onboarding#23 · created Apr 06, 2021 by Venkat Malladi
    • CLOSED
    • 1
    • 0
    updated Apr 06, 2021
  • Fix README
    BICF/Astrocyte/sra_pipeline#28 · created Nov 24, 2020 by Jeremy Mathews
    • CLOSED
    • 1
    • 0
    updated Nov 25, 2020
  • Update cancer gene
    BICF/KCE/kce_etl#30 · created Oct 19, 2020 by Venkat Malladi
    • CLOSED
    • 1
    • 0
    updated Oct 19, 2020
  • Update orcid Jason and Holly
    onboarding#22 · created Aug 31, 2020 by Venkat Malladi
    • CLOSED
    • 1
    • 0
    updated Aug 31, 2020
  • map reads fails to make bam files for long reads
    BICF/Astrocyte/atacseq_analysis#43 · created Jul 28, 2020 by Venkat Malladi   bug critical
    • CLOSED
    • 1
    • 1
    updated Jul 29, 2020
  • Update outside collaboration fee structure
    onboarding#21 · created Jul 14, 2020 by Venkat Malladi
    • CLOSED
    • 1
    • 0
    updated Jul 14, 2020
  • Gender to sex
    BICF/KCE/kce_etl#29 · created Jul 01, 2020 by Venkat Malladi
    • CLOSED
    • 1
    updated Jul 01, 2020
  • Track chip-seq usage
    BICF/Astrocyte/chipseq_analysis#84 · created Jun 19, 2020 by Venkat Malladi
    • CLOSED
    • 1
    • 1
    updated Jul 01, 2020
  • Astrocyte fixes
    BICF/Astrocyte/atacseq_analysis#40 · created Jun 19, 2020 by Venkat Malladi
    • CLOSED
    • 1
    • 0
    updated Jun 21, 2020
  • Update doi in Readme
    BICF/Astrocyte/sra_pipeline#23 · created Jun 17, 2020 by Venkat Malladi
    • CLOSED
    • 1
    • 0
    updated Aug 15, 2020
  • Tests for astrocyte
    BICF/Astrocyte/atacseq_analysis#39 · created Jun 11, 2020 by Venkat Malladi
    • CLOSED
    • 1
    • 0
    updated Jun 18, 2020
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