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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Remove artifacts

BICF/Astrocyte/chipseq_analysis#68 · created Sep 26, 2019 by Venkat Malladi 1.1.0 bug
- CLOSED
- 1
- 0
updated Mar 15, 2020
Update version of multiqc

BICF/Astrocyte/chipseq_analysis#76 · created Feb 10, 2020 by Holly Ruess 1.1.0 bug enhancement
- CLOSED
- 1
updated Mar 15, 2020
Update Hourly Help Desk for Subtask

onboarding#13 · created Jan 03, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Feb 26, 2020
Generate MultiQC report

BICF/Astrocyte/atacseq_analysis#26 · created Jan 06, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Feb 25, 2020
AWSify

BICF/Astrocyte/cellranger_count#39 · created Dec 23, 2019 by Gervaise Henry v2.1.1 Doing enhancement
- CLOSED
- 1
- 0
updated Feb 21, 2020
Update multiqc with new singularity images

BICF/Astrocyte/chipseq_analysis#72 · created Jan 07, 2020 by Venkat Malladi
- CLOSED
- 1
updated Feb 12, 2020
Add tests surgery

BICF/KCE/kce_etl#26 · created Jan 28, 2020 by Venkat Malladi
- 1
updated Feb 07, 2020
Update to Singularity Image 2.0.0 compatability.

BICF/Astrocyte/sra_pipeline#12 · created Jan 16, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability Updates
- CLOSED
- 2
- 0
updated Feb 05, 2020
Surgery Table

BICF/KCE/kce_etl#9 · created Jul 09, 2019 by Venkat Malladi
- CLOSED
- 1
- 0
updated Jan 28, 2020
Make a link in redmine.md

onboarding#15 · created Jan 23, 2020 by Venkat Malladi
- CLOSED
- 1
updated Jan 24, 2020
Update Astrocyte instructions

BICF/Astrocyte/rnaseq#19 · created Jan 07, 2020 by Venkat Malladi
- CLOSED
- 1
- 1
updated Jan 07, 2020
Fix BioHPC config

BICF/Astrocyte/atacseq_analysis#25 · created Jan 06, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jan 07, 2020
Fix call peaks MACs

BICF/Astrocyte/atacseq_analysis#23 · created Jan 02, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
updated Jan 07, 2020
fix consensus peaks

BICF/Astrocyte/atacseq_analysis#24 · created Jan 03, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jan 07, 2020
Make hg19 test

BICF/Astrocyte/atacseq_analysis#22 · created Jan 01, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 0
updated Jan 06, 2020
Shift is incorrect for ATAC-seq

BICF/Astrocyte/atacseq_analysis#7 · created May 02, 2019 by Venkat Malladi Version 2.0 bug
- CLOSED
- 1
updated Jan 06, 2020
Fix Pool and Pseudoreps

BICF/Astrocyte/atacseq_analysis#20 · created Dec 20, 2019 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jan 03, 2020
Fix cross correlation

BICF/Astrocyte/atacseq_analysis#19 · created Dec 19, 2019 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jan 03, 2020
deeptools version 3 error

BICF/Astrocyte/atacseq_analysis#2 · created May 11, 2018 by Spencer Barnes Version 2.0 enhancment
- CLOSED
- 1
updated Jan 02, 2020
mitochondrial chromosome reads

BICF/Astrocyte/atacseq_analysis#3 · created May 11, 2018 by Spencer Barnes Version 2.0 critical
- CLOSED
- 0
updated Jan 02, 2020

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