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BICF
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Add base mask
BICF/Astrocyte/cellranger_mkfastq#39
· created
Mar 20, 2020
by
Gervaise Henry
v2.1.5
Doing
enhancement
CLOSED
1
2
updated
Jun 20, 2020
Ignore dual index
BICF/Astrocyte/cellranger_mkfastq#38
· created
Mar 19, 2020
by
Gervaise Henry
v2.1.5
Doing
critical
enhancement
CLOSED
1
1
updated
Jun 20, 2020
Update to Astrocyte 0.2.0
BICF/Astrocyte/chipseq_analysis#77
· created
Mar 15, 2020
by
Venkat Malladi
1.1.0
Test
CLOSED
1
0
updated
Mar 21, 2020
update version of nextflow
BICF/Astrocyte/atacseq_analysis#36
· created
Feb 26, 2020
by
Holly Ruess
Version 2.1.0
critical
enhancment
0
updated
Jun 23, 2020
Add ulimit to cellranger process
BICF/Astrocyte/cellranger_mkfastq#37
· created
Feb 21, 2020
by
Gervaise Henry
v2.1.5
Doing
bug
confirmed
critical
CLOSED
1
1
updated
Jun 20, 2020
BUG: thread error on Astrocyte
BICF/Astrocyte/cellranger_count#40
· created
Feb 21, 2020
by
Gervaise Henry
v2.1.1
bug
confirmed
critical
CLOSED
1
0
updated
Apr 20, 2020
Update version of multiqc
BICF/Astrocyte/chipseq_analysis#76
· created
Feb 10, 2020
by
Holly Ruess
1.1.0
bug
enhancement
CLOSED
1
updated
Mar 15, 2020
updateUnitTests
BICF/Astrocyte/sra_pipeline#14
· created
Feb 06, 2020
by
Jonathan Gesell
Singularity 2.0.0 Compatability
To Do
Updates
CLOSED
1
1
updated
Jun 17, 2020
nullDataError
BICF/Astrocyte/sra_pipeline#13
· created
Feb 06, 2020
by
Jonathan Gesell
Bug fixes
To Do
0
updated
Apr 20, 2020
Rename Plot profile to be consistent with naming
BICF/Astrocyte/chipseq_analysis#75
· created
Feb 05, 2020
by
Venkat Malladi
1.1.0
Test
CLOSED
1
0
updated
Apr 21, 2020
Annotepeaks
BICF/Astrocyte/chipseq_analysis#74
· created
Feb 03, 2020
by
Venkat Malladi
2.0.0
Doing
enhancement
1
updated
Jun 23, 2020
Add tests surgery
BICF/KCE/kce_etl#26
· created
Jan 28, 2020
by
Venkat Malladi
1
updated
Feb 07, 2020
Make a link in redmine.md
onboarding#15
· created
Jan 23, 2020
by
Venkat Malladi
CLOSED
1
updated
Jan 24, 2020
Update to Singularity Image 2.0.0 compatability.
BICF/Astrocyte/sra_pipeline#12
· created
Jan 16, 2020
by
Jonathan Gesell
Singularity 2.0.0 Compatability
Updates
CLOSED
2
0
updated
Feb 05, 2020
Change to 256 only if job fails
BICF/Astrocyte/atacseq_analysis#35
· created
Jan 09, 2020
by
Holly Ruess
Version 2.1.0
enhancment
0
updated
Jun 23, 2020
Diff Peak analysis
BICF/Astrocyte/atacseq_analysis#34
· created
Jan 09, 2020
by
Holly Ruess
Version 2.1.0
enhancment
0
updated
Jun 23, 2020
Motif search in peaks
BICF/Astrocyte/atacseq_analysis#33
· created
Jan 09, 2020
by
Holly Ruess
Version 2.1.0
enhancment
0
updated
Jun 23, 2020
Annotate peaks
BICF/Astrocyte/atacseq_analysis#32
· created
Jan 09, 2020
by
Holly Ruess
Version 2.0
enhancment
CLOSED
1
0
updated
Jun 11, 2020
Blacklist of regions
BICF/Astrocyte/atacseq_analysis#31
· created
Jan 09, 2020
by
Holly Ruess
Version 2.0
enhancment
CLOSED
1
0
updated
Jun 09, 2020
TSS enrichment score
BICF/Astrocyte/atacseq_analysis#30
· created
Jan 09, 2020
by
Holly Ruess
Version 2.0
enhancment
CLOSED
2
0
updated
May 28, 2020
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