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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Fix config file

BICF/Astrocyte/cellranger_count#7 · created Feb 15, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Mar 05, 2019
Add in Macs2 support

BICF/Astrocyte/chipseq_analysis#7 · created Oct 11, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Nov 20, 2017
Vizapp shiny option: Implement Bookmarking for saving sessions on shiny app.

BICF/Astrocyte/rnaseq#7 · created Apr 17, 2018 by Min Kim
- 0
updated Apr 17, 2018
Update Documentation

BICF/Astrocyte/cellranger_mkfastq#7 · created Apr 08, 2019 by Gervaise Henry Astrocyte Production (v1.0.0) documentation
- CLOSED
- 1
- 0
updated May 24, 2019
Shift is incorrect for ATAC-seq

BICF/Astrocyte/atacseq_analysis#7 · created May 02, 2019 by Venkat Malladi Version 2.0 bug
- CLOSED
- 1
updated Jan 06, 2020
IHC

BICF/KCE/kce_etl#7 · created Jul 09, 2019 by Venkat Malladi
- 0
updated Jul 09, 2019
Add Addtional ORCID

onboarding#7 · created Jul 29, 2019 by Venkat Malladi
- CLOSED
- 1
- 0
updated Aug 02, 2019
correct check design

BICF/Astrocyte/sra_pipeline#7 · created Aug 19, 2019 by Jonathan Gesell Bug fixes error correction
- CLOSED
- 1
updated Aug 28, 2019
Add cellranger 3.0.2 as option

BICF/Astrocyte/cellranger_count#8 · created Mar 04, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 1
updated Mar 04, 2019
Update documentation

BICF/Astrocyte/chipseq_analysis#8 · created Oct 11, 2017 by Venkat Malladi 1.0.0 documentation enhancement
- CLOSED
- 2
- 0
updated May 06, 2019
Update of RNASeq documentation and check_designfile.pl

BICF/Astrocyte/rnaseq#8 · created May 11, 2018 by Spencer Barnes
- 2
updated May 16, 2018
Create design file for cellranger_count pipeline

BICF/Astrocyte/cellranger_mkfastq#8 · created Apr 09, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 1
- 0
updated Jul 22, 2019
Make ATAC-seq pipeline generalizibe for Open Chromatin

BICF/Astrocyte/atacseq_analysis#8 · created May 02, 2019 by Venkat Malladi Version 1.0 enhancment
- CLOSED
- 1
updated Dec 03, 2019
Biopsy

BICF/KCE/kce_etl#8 · created Jul 09, 2019 by Venkat Malladi
- CLOSED
- 1
updated Aug 12, 2021
Add in Single Cell working Group Meeting

onboarding#8 · created Sep 05, 2019 by Venkat Malladi
- CLOSED
- 0
updated Sep 05, 2019
Azure Compatability

BICF/Astrocyte/sra_pipeline#8 · created Sep 09, 2019 by Jonathan Gesell Azure Functionality testing
- CLOSED
- 1
updated Aug 27, 2020
Add cellranger references version 3.0.0 as options

BICF/Astrocyte/cellranger_count#9 · created Mar 04, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Mar 05, 2019
DEA Skip

BICF/Astrocyte/rnaseq#9 · created May 15, 2018 by Jonathan Gesell
- CLOSED
- 1
updated May 16, 2018
Split multiqc fastqc by r1/r2/i1

BICF/Astrocyte/cellranger_mkfastq#9 · created Apr 09, 2019 by Gervaise Henry Astrocyte Production (v1.0.0) enhancement
- CLOSED
- 1
- 0
updated Apr 12, 2019
Add in references and version used in script

BICF/Astrocyte/atacseq_analysis#9 · created May 02, 2019 by Venkat Malladi Version 2.0 critical
- CLOSED
- 1
updated May 28, 2020

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