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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

New Beaker code

BICF/KCE/kce_etl#27 · created Apr 25, 2020 by Venkat Malladi
- 0
updated Apr 25, 2020
Thread error on BioHPC

BICF/Astrocyte/cellranger_count#44 · created Apr 20, 2020 by Gervaise Henry v2.1.1 Doing To Do bug confirmed critical
- CLOSED
- 1
- 0
updated Apr 20, 2020
Git CI stall solution update

onboarding#19 · created Apr 13, 2020 by Gervaise Henry
- CLOSED
- 1
- 0
updated Apr 14, 2020
Remove unnecessary files from output

BICF/Astrocyte/cellranger_count#43 · created Apr 13, 2020 by Gervaise Henry v2.1.1 Doing enhancement
- CLOSED
- 0
updated Apr 14, 2020
Update params to current standards

BICF/Astrocyte/cellranger_count#42 · created Apr 13, 2020 by Gervaise Henry v2.1.1 Doing enhancement
- CLOSED
- 1
- 0
updated Apr 15, 2020
Containerize

BICF/Astrocyte/cellranger_count#41 · created Apr 13, 2020 by Gervaise Henry v2.1.1 Doing enhancement
- CLOSED
- 1
- 2
updated Apr 15, 2020
Add license

BICF/Astrocyte/atacseq_analysis#38 · created Apr 06, 2020 by Venkat Malladi Version 2.0
- CLOSED
- 1
- 0
updated May 07, 2020
Update Astrocyte configuration 4 of 8 tasks completed

BICF/Astrocyte/sra_pipeline#18 · created Apr 04, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Jun 01, 2020
Need Zenodo registration

BICF/Astrocyte/sra_pipeline#17 · created Apr 03, 2020 by Gervaise Henry
- CLOSED
- 1
- 2
updated Apr 20, 2020
BUG: Cannot handle multiple runs

BICF/Astrocyte/sra_pipeline#16 · created Apr 03, 2020 by Gervaise Henry To Do
- CLOSED
- 1
- 2
updated Jun 01, 2020
Software Development

onboarding#18 · created Apr 02, 2020 by Venkat Malladi
- CLOSED
- 2
- 0
updated Apr 08, 2020
Fix runners and sigbus error

BICF/Astrocyte/atacseq_analysis#37 · created Mar 31, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated May 08, 2020
Disk quota exceeded

BICF/Astrocyte/chipseq_analysis#82 · created Mar 31, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
updated Apr 13, 2020
CI and Nextflow configuration

onboarding#17 · created Mar 31, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Apr 13, 2020
Config Lock git

BICF/Astrocyte/chipseq_analysis#81 · created Mar 30, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
updated Apr 16, 2020
Gitlab CI overridding concurrent pipelines

BICF/Astrocyte/chipseq_analysis#80 · created Mar 28, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
- 5
updated Apr 16, 2020
Fix sigbus error

BICF/Astrocyte/chipseq_analysis#79 · created Mar 28, 2020 by Venkat Malladi bug critical
- CLOSED
- 1
- 2
updated Apr 16, 2020
Convert SOLID sequencing to basecall

BICF/Astrocyte/sra_pipeline#15 · created Mar 26, 2020 by Venkat Malladi Bug fixes To Do error correction
- CLOSED
- 1
- 0
updated Jun 01, 2020
Paired-end Diffbind peaks gives different answer

BICF/Astrocyte/chipseq_analysis#78 · created Mar 25, 2020 by Venkat Malladi 1.1.0 Test bug
- CLOSED
- 1
- 0
updated Apr 20, 2020
Authorship guidelines

onboarding#16 · created Mar 23, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Mar 31, 2020

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