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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Update version of multiqc

BICF/Astrocyte/chipseq_analysis#76 · created Feb 10, 2020 by Holly Ruess 1.1.0 bug enhancement
- CLOSED
- 1
updated Mar 15, 2020
updateUnitTests

BICF/Astrocyte/sra_pipeline#14 · created Feb 06, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability To Do Updates
- CLOSED
- 1
- 1
updated Jun 17, 2020
Rename Plot profile to be consistent with naming

BICF/Astrocyte/chipseq_analysis#75 · created Feb 05, 2020 by Venkat Malladi 1.1.0 Test
- CLOSED
- 1
- 0
updated Apr 21, 2020
Make a link in redmine.md

onboarding#15 · created Jan 23, 2020 by Venkat Malladi
- CLOSED
- 1
updated Jan 24, 2020
Update to Singularity Image 2.0.0 compatability.

BICF/Astrocyte/sra_pipeline#12 · created Jan 16, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability Updates
- CLOSED
- 2
- 0
updated Feb 05, 2020
Annotate peaks

BICF/Astrocyte/atacseq_analysis#32 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jun 11, 2020
Blacklist of regions

BICF/Astrocyte/atacseq_analysis#31 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jun 09, 2020
TSS enrichment score

BICF/Astrocyte/atacseq_analysis#30 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 0
updated May 28, 2020
Add FRiP score

BICF/Astrocyte/atacseq_analysis#29 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 0
updated May 13, 2020
Add percent of reads - mitochondria

BICF/Astrocyte/atacseq_analysis#28 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Mar 24, 2020
Add fragment size distribution

BICF/Astrocyte/atacseq_analysis#27 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 1
updated Jun 09, 2020
Single Rep Pool and Pseudo

BICF/Astrocyte/chipseq_analysis#73 · created Jan 07, 2020 by Venkat Malladi 1.1.1 Test bug
- CLOSED
- 1
- 0
updated Mar 24, 2020
Update multiqc with new singularity images

BICF/Astrocyte/chipseq_analysis#72 · created Jan 07, 2020 by Venkat Malladi
- CLOSED
- 1
updated Feb 12, 2020
Update Astrocyte instructions

BICF/Astrocyte/rnaseq#19 · created Jan 07, 2020 by Venkat Malladi
- CLOSED
- 1
- 1
updated Jan 07, 2020
Generate MultiQC report

BICF/Astrocyte/atacseq_analysis#26 · created Jan 06, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Feb 25, 2020
Fix BioHPC config

BICF/Astrocyte/atacseq_analysis#25 · created Jan 06, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jan 07, 2020
Docker Documentaion

onboarding#14 · created Jan 03, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Apr 06, 2021
Update Hourly Help Desk for Subtask

onboarding#13 · created Jan 03, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Feb 26, 2020
fix consensus peaks

BICF/Astrocyte/atacseq_analysis#24 · created Jan 03, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jan 07, 2020
Fix call peaks MACs

BICF/Astrocyte/atacseq_analysis#23 · created Jan 02, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
updated Jan 07, 2020

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