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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Change to 256 only if job fails

BICF/Astrocyte/atacseq_analysis#35 · created Jan 09, 2020 by Holly Ruess Version 2.1.0 enhancment
- 0
updated Jun 23, 2020
update version of nextflow

BICF/Astrocyte/atacseq_analysis#36 · created Feb 26, 2020 by Holly Ruess Version 2.1.0 critical enhancment
- 0
updated Jun 23, 2020
Memory

BICF/Astrocyte/chipseq_analysis#32 · created Mar 12, 2019 by Venkat Malladi 3.0.0 discussion
- 0
updated Jun 23, 2020
Containerization

BICF/Astrocyte/chipseq_analysis#64 · created Sep 12, 2019 by Jonathan Gesell 3.0.0 To Do
- 0
updated Jun 23, 2020
add checks to determine if fastq files are in proper format and not truncated

BICF/Astrocyte/chipseq_analysis#69 · created Oct 30, 2019 by Spencer Barnes 2.0.0 To Do
- 0
updated Jun 23, 2020
Make both astrocyte compatable and other cluster compatable

BICF/Astrocyte/chipseq_analysis#60 · created Jul 10, 2019 by Holly Ruess 3.0.0 To Do enhancement
- 0
updated Jun 23, 2020
diffbind design file error

BICF/Astrocyte/chipseq_analysis#44 · created May 09, 2019 by Spencer Barnes 2.0.0 To Do bug discussion
- 1
updated Jun 23, 2020
Optimizations

BICF/Astrocyte/chipseq_analysis#39 · created Apr 23, 2019 by Jonathan Gesell 3.0.0 discussion enhancement
- 0
updated Jun 23, 2020
Add in peak call with SPP and IDR

BICF/Astrocyte/chipseq_analysis#14 · created Nov 14, 2017 by Venkat Malladi 2.0.0 To Do enhancement
- 0
updated Jun 23, 2020
Add in blacklist

BICF/Astrocyte/chipseq_analysis#9 · created Oct 11, 2017 by Venkat Malladi 2.0.0 To Do enhancement
- 0
updated Jun 23, 2020
Annotepeaks

BICF/Astrocyte/chipseq_analysis#74 · created Feb 03, 2020 by Venkat Malladi 2.0.0 Doing enhancement
- 1
updated Jun 23, 2020
Unique Experiment check

BICF/Astrocyte/chipseq_analysis#83 · created May 24, 2020 by Venkat Malladi 2.0.0
- 0
updated Jun 23, 2020
Update multiqc version/references report

BICF/Astrocyte/chipseq_analysis#85 · created Jun 23, 2020 by Gervaise Henry 2.0.0 To Do documentation enhancement
- 0
updated Jun 23, 2020
Add ability to count additional features

BICF/Astrocyte/cellranger_count#10 · created Mar 04, 2019 by Gervaise Henry Pending To Do enhancement
- 0
updated Jun 21, 2020
Containerize Pipeline

BICF/Astrocyte/sra_pipeline#24 · created Jun 17, 2020 by Jonathan Gesell Azure Functionality Doing Updates testing
- 0
updated Jun 17, 2020
Parallelize tests

BICF/Astrocyte/sra_pipeline#22 · created Jun 16, 2020 by Jonathan Gesell Doing Updates testing
- 0
updated Jun 16, 2020
Add concatination flag

BICF/Astrocyte/sra_pipeline#19 · created Apr 30, 2020 by Jonathan Gesell Astrocyte Functionality Bug fixes Doing
- 0
updated Apr 30, 2020
Comparison Script

BICF/KCE/kce_etl#28 · created Apr 25, 2020 by Venkat Malladi
- 0
updated Apr 25, 2020
New Beaker code

BICF/KCE/kce_etl#27 · created Apr 25, 2020 by Venkat Malladi
- 0
updated Apr 25, 2020
nullDataError

BICF/Astrocyte/sra_pipeline#13 · created Feb 06, 2020 by Jonathan Gesell Bug fixes To Do
- 0
updated Apr 20, 2020

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