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Blocking
Change to 256 only if job fails
BICF/Astrocyte/atacseq_analysis#35
· created
Jan 09, 2020
by
Holly Ruess
Version 2.1.0
enhancment
0
updated
Jun 23, 2020
update version of nextflow
BICF/Astrocyte/atacseq_analysis#36
· created
Feb 26, 2020
by
Holly Ruess
Version 2.1.0
critical
enhancment
0
updated
Jun 23, 2020
Memory
BICF/Astrocyte/chipseq_analysis#32
· created
Mar 12, 2019
by
Venkat Malladi
3.0.0
discussion
0
updated
Jun 23, 2020
Containerization
BICF/Astrocyte/chipseq_analysis#64
· created
Sep 12, 2019
by
Jonathan Gesell
3.0.0
To Do
0
updated
Jun 23, 2020
add checks to determine if fastq files are in proper format and not truncated
BICF/Astrocyte/chipseq_analysis#69
· created
Oct 30, 2019
by
Spencer Barnes
2.0.0
To Do
0
updated
Jun 23, 2020
Make both astrocyte compatable and other cluster compatable
BICF/Astrocyte/chipseq_analysis#60
· created
Jul 10, 2019
by
Holly Ruess
3.0.0
To Do
enhancement
0
updated
Jun 23, 2020
diffbind design file error
BICF/Astrocyte/chipseq_analysis#44
· created
May 09, 2019
by
Spencer Barnes
2.0.0
To Do
bug
discussion
1
updated
Jun 23, 2020
Optimizations
BICF/Astrocyte/chipseq_analysis#39
· created
Apr 23, 2019
by
Jonathan Gesell
3.0.0
discussion
enhancement
0
updated
Jun 23, 2020
Add in peak call with SPP and IDR
BICF/Astrocyte/chipseq_analysis#14
· created
Nov 14, 2017
by
Venkat Malladi
2.0.0
To Do
enhancement
0
updated
Jun 23, 2020
Add in blacklist
BICF/Astrocyte/chipseq_analysis#9
· created
Oct 11, 2017
by
Venkat Malladi
2.0.0
To Do
enhancement
0
updated
Jun 23, 2020
Annotepeaks
BICF/Astrocyte/chipseq_analysis#74
· created
Feb 03, 2020
by
Venkat Malladi
2.0.0
Doing
enhancement
1
updated
Jun 23, 2020
Unique Experiment check
BICF/Astrocyte/chipseq_analysis#83
· created
May 24, 2020
by
Venkat Malladi
2.0.0
0
updated
Jun 23, 2020
Update multiqc version/references report
BICF/Astrocyte/chipseq_analysis#85
· created
Jun 23, 2020
by
Gervaise Henry
2.0.0
To Do
documentation
enhancement
0
updated
Jun 23, 2020
Add ability to count additional features
BICF/Astrocyte/cellranger_count#10
· created
Mar 04, 2019
by
Gervaise Henry
Pending
To Do
enhancement
0
updated
Jun 21, 2020
Containerize Pipeline
BICF/Astrocyte/sra_pipeline#24
· created
Jun 17, 2020
by
Jonathan Gesell
Azure Functionality
Doing
Updates
testing
0
updated
Jun 17, 2020
Parallelize tests
BICF/Astrocyte/sra_pipeline#22
· created
Jun 16, 2020
by
Jonathan Gesell
Doing
Updates
testing
0
updated
Jun 16, 2020
Add concatination flag
BICF/Astrocyte/sra_pipeline#19
· created
Apr 30, 2020
by
Jonathan Gesell
Astrocyte Functionality
Bug fixes
Doing
0
updated
Apr 30, 2020
Comparison Script
BICF/KCE/kce_etl#28
· created
Apr 25, 2020
by
Venkat Malladi
0
updated
Apr 25, 2020
New Beaker code
BICF/KCE/kce_etl#27
· created
Apr 25, 2020
by
Venkat Malladi
0
updated
Apr 25, 2020
nullDataError
BICF/Astrocyte/sra_pipeline#13
· created
Feb 06, 2020
by
Jonathan Gesell
Bug fixes
To Do
0
updated
Apr 20, 2020
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