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  • BICF
  • Issues

  • Open 76
  • Closed 273
  • All 349
  • Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking
  • create down-sampled test data
    BICF/Astrocyte/chipseq_analysis#88 · created Aug 07, 2020 by Spencer Barnes
    • 0
    updated Aug 07, 2020
  • Pipeline maintaince documentation
    onboarding#20 · created Jun 30, 2020 by Venkat Malladi
    • 0
    updated Apr 06, 2021
  • update test for astrocyte 0.3.1
    BICF/Astrocyte/sra_pipeline#25 · created Jun 26, 2020 by Venkat Malladi
    • 0
    updated Jun 26, 2020
  • Update multiqc version/references report
    BICF/Astrocyte/cellranger_count#48 · created Jun 23, 2020 by Gervaise Henry   3.0.0   To Do documentation enhancement
    • 0
    updated Nov 03, 2020
  • Update multiqc version/references report
    BICF/Astrocyte/cellranger_mkfastq#40 · created Jun 23, 2020 by Gervaise Henry   Pending   To Do documentation enhancement
    • 0
    updated Nov 03, 2020
  • Parallelize tests
    BICF/Astrocyte/sra_pipeline#22 · created Jun 16, 2020 by Jonathan Gesell   Doing Updates testing
    • 0
    updated Jun 16, 2020
  • Add simple integration CI test
    BICF/Astrocyte/cellranger_count#46 · created Apr 26, 2020 by Gervaise Henry   3.0.0   To Do enhancement
    • 0
    updated Nov 03, 2020
  • Comparison Script
    BICF/KCE/kce_etl#28 · created Apr 25, 2020 by Venkat Malladi
    • 0
    updated Apr 25, 2020
  • New Beaker code
    BICF/KCE/kce_etl#27 · created Apr 25, 2020 by Venkat Malladi
    • 0
    updated Apr 25, 2020
  • nullDataError
    BICF/Astrocyte/sra_pipeline#13 · created Feb 06, 2020 by Jonathan Gesell   Bug fixes To Do
    • 0
    updated Apr 20, 2020
  • Add tests surgery
    BICF/KCE/kce_etl#26 · created Jan 28, 2020 by Venkat Malladi
    • 1
    updated Feb 07, 2020
  • Add tests radiation
    BICF/KCE/kce_etl#25 · created Dec 12, 2019 by Venkat Malladi
    • 0
    updated Dec 12, 2019
  • Add tests Medication
    BICF/KCE/kce_etl#24 · created Dec 12, 2019 by Venkat Malladi
    • 0
    updated Dec 12, 2019
  • File vs Channel
    BICF/Astrocyte/sra_pipeline#10 · created Dec 03, 2019 by Jeremy Mathews   To Do
    • 1
    • 3
    updated Aug 27, 2020
  • Containerization
    BICF/Astrocyte/chipseq_analysis#64 · created Sep 12, 2019 by Jonathan Gesell   3.0.0   To Do
    • 0
    updated Jun 23, 2020
  • Shiny App   4 of 6 tasks completed
    BICF/Astrocyte/cellranger_count#35 · created Jul 31, 2019 by Gervaise Henry   Wait enhancement
    • 1
    updated Aug 02, 2020
  • Create output plots
    BICF/Astrocyte/cellranger_count#34 · created Jul 31, 2019 by Gervaise Henry   Wait enhancement
    • 0
    updated Aug 02, 2020
  • Make both astrocyte compatable and other cluster compatable
    BICF/Astrocyte/chipseq_analysis#60 · created Jul 10, 2019 by Holly Ruess   3.0.0   To Do enhancement
    • 0
    updated Jun 23, 2020
  • Genomics inventory
    BICF/KCE/kce_etl#16 · created Jul 09, 2019 by Venkat Malladi
    • 0
    updated Jul 01, 2020
  • Copath All table
    BICF/KCE/kce_etl#13 · created Jul 09, 2019 by Venkat Malladi
    • 0
    updated Jul 09, 2019
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