Skip to content

GitLab

Menu

Projects Groups Snippets

Loading...
Help
Sign in

BICF
Group information
- Group information
- Activity
- Labels
- Members
Epics 0
- Epics 0
- List
- Boards
- Roadmap
Issues 76
- Issues 76
- List
- Boards
- Milestones
- Iterations
Merge requests 3
- Merge requests 3
Security & Compliance
- Security & Compliance
- Security dashboard
- Vulnerability report
Packages & Registries
- Packages & Registries
- Package Registry
Analytics
- Analytics
- Insights
- Issue
Wiki
- Wiki

Collapse sidebar

BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

diffbind design file error

BICF/Astrocyte/chipseq_analysis#44 · created May 09, 2019 by Spencer Barnes 2.0.0 To Do bug discussion
- 1
updated Jun 23, 2020
map_reads failure case

BICF/Astrocyte/atacseq_analysis#1 · created Apr 12, 2018 by Spencer Barnes Version 2.1.0 bug
- 0
updated Jun 23, 2020
Add in peak call with SPP and IDR

BICF/Astrocyte/chipseq_analysis#14 · created Nov 14, 2017 by Venkat Malladi 2.0.0 To Do enhancement
- 0
updated Jun 23, 2020
Add in blacklist

BICF/Astrocyte/chipseq_analysis#9 · created Oct 11, 2017 by Venkat Malladi 2.0.0 To Do enhancement
- 0
updated Jun 23, 2020
Add 5GEXPE/SE as library options

BICF/Astrocyte/cellranger_count#56 · created Nov 20, 2020 by Gervaise Henry 3.0.0 Doing critical
- CLOSED
- 2
- 0
updated Nov 20, 2020
Add ability to handle dual index

BICF/Astrocyte/cellranger_mkfastq#44 · created Oct 30, 2020 by Gervaise Henry Pending To Do critical enhancement
- 4
updated Nov 03, 2020
Thread error on BioHPC

BICF/Astrocyte/cellranger_count#44 · created Apr 20, 2020 by Gervaise Henry v2.1.1 Doing To Do bug confirmed critical
- CLOSED
- 1
- 0
updated Apr 20, 2020
Ignore dual index

BICF/Astrocyte/cellranger_mkfastq#38 · created Mar 19, 2020 by Gervaise Henry v2.1.5 Doing critical enhancement
- CLOSED
- 1
- 1
updated Jun 20, 2020
Add ulimit to cellranger process

BICF/Astrocyte/cellranger_mkfastq#37 · created Feb 21, 2020 by Gervaise Henry v2.1.5 Doing bug confirmed critical
- CLOSED
- 1
- 1
updated Jun 20, 2020
BUG: thread error on Astrocyte

BICF/Astrocyte/cellranger_count#40 · created Feb 21, 2020 by Gervaise Henry v2.1.1 bug confirmed critical
- CLOSED
- 1
- 0
updated Apr 20, 2020
Add 3':5' param

BICF/Astrocyte/cellranger_count#38 · created Dec 05, 2019 by Gervaise Henry v2.1.1 Doing critical enhancement
- CLOSED
- 1
- 0
updated Apr 14, 2020
Fix astrocyte regex

BICF/Astrocyte/cellranger_mkfastq#15 · created Apr 25, 2019 by Gervaise Henry v1.1.0 bug critical
- CLOSED
- 2
- 0
updated Apr 26, 2019
Change nextflow fastq rename to iterate sample not lane

BICF/Astrocyte/cellranger_count#19 · created Mar 27, 2019 by Gervaise Henry v1.1.0 bug critical
- CLOSED
- 1
- 0
updated Apr 26, 2019
5GEX QC data not present in multiqc report

BICF/Astrocyte/cellranger_count#54 · created Nov 04, 2020 by Gervaise Henry 3.0.0 To Do bug confirmed
- 0
updated Nov 04, 2020
Ref 2020-A not compatible with cellrangers < 4.0.0

BICF/Astrocyte/cellranger_count#53 · created Oct 16, 2020 by Gervaise Henry 3.0.0 To Do bug
- 1
updated Nov 20, 2020
Add test for astrocyte specific run of pipline 3 of 3 tasks completed

BICF/Astrocyte/cellranger_mkfastq#41 · created Jun 26, 2020 by Venkat Malladi To Do bug
- 1
- 0
updated Oct 30, 2020
Add test for astrocyte 0.3.1 0 of 3 tasks completed

BICF/Astrocyte/cellranger_count#49 · created Jun 26, 2020 by Venkat Malladi Wait bug
- 0
updated Aug 02, 2020
Multiqc failure

BICF/Astrocyte/cellranger_count#45 · created Apr 26, 2020 by Gervaise Henry To Do bug
- CLOSED
- 1
- 0
updated Apr 26, 2020
add checks to checkDesign process

BICF/Astrocyte/cellranger_mkfastq#34 · created Sep 11, 2019 by Spencer Barnes v2.1.5 bug enhancement
- CLOSED
- 1
- 2
updated Nov 07, 2019
Check for space in design file error

BICF/Astrocyte/cellranger_count#37 · created Sep 03, 2019 by Gervaise Henry v2.1.1 bug
- CLOSED
- 1
- 1
updated Nov 07, 2019

Prev
1
2
3
4
5
6
7
…
18
Next