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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Git CI stall solution update

onboarding#19 · created Apr 13, 2020 by Gervaise Henry
- CLOSED
- 1
- 0
updated Apr 14, 2020
Remove unnecessary files from output

BICF/Astrocyte/cellranger_count#43 · created Apr 13, 2020 by Gervaise Henry v2.1.1 Doing enhancement
- CLOSED
- 0
updated Apr 14, 2020
Update params to current standards

BICF/Astrocyte/cellranger_count#42 · created Apr 13, 2020 by Gervaise Henry v2.1.1 Doing enhancement
- CLOSED
- 1
- 0
updated Apr 15, 2020
Containerize

BICF/Astrocyte/cellranger_count#41 · created Apr 13, 2020 by Gervaise Henry v2.1.1 Doing enhancement
- CLOSED
- 1
- 2
updated Apr 15, 2020
Add license

BICF/Astrocyte/atacseq_analysis#38 · created Apr 06, 2020 by Venkat Malladi Version 2.0
- CLOSED
- 1
- 0
updated May 07, 2020
Update Astrocyte configuration 4 of 8 tasks completed

BICF/Astrocyte/sra_pipeline#18 · created Apr 04, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Jun 01, 2020
Need Zenodo registration

BICF/Astrocyte/sra_pipeline#17 · created Apr 03, 2020 by Gervaise Henry
- CLOSED
- 1
- 2
updated Apr 20, 2020
BUG: Cannot handle multiple runs

BICF/Astrocyte/sra_pipeline#16 · created Apr 03, 2020 by Gervaise Henry To Do
- CLOSED
- 1
- 2
updated Jun 01, 2020
Software Development

onboarding#18 · created Apr 02, 2020 by Venkat Malladi
- CLOSED
- 2
- 0
updated Apr 08, 2020
Fix runners and sigbus error

BICF/Astrocyte/atacseq_analysis#37 · created Mar 31, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated May 08, 2020
Disk quota exceeded

BICF/Astrocyte/chipseq_analysis#82 · created Mar 31, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
updated Apr 13, 2020
CI and Nextflow configuration

onboarding#17 · created Mar 31, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Apr 13, 2020
Config Lock git

BICF/Astrocyte/chipseq_analysis#81 · created Mar 30, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
updated Apr 16, 2020
Gitlab CI overridding concurrent pipelines

BICF/Astrocyte/chipseq_analysis#80 · created Mar 28, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
- 5
updated Apr 16, 2020
Fix sigbus error

BICF/Astrocyte/chipseq_analysis#79 · created Mar 28, 2020 by Venkat Malladi bug critical
- CLOSED
- 1
- 2
updated Apr 16, 2020
Convert SOLID sequencing to basecall

BICF/Astrocyte/sra_pipeline#15 · created Mar 26, 2020 by Venkat Malladi Bug fixes To Do error correction
- CLOSED
- 1
- 0
updated Jun 01, 2020
Paired-end Diffbind peaks gives different answer

BICF/Astrocyte/chipseq_analysis#78 · created Mar 25, 2020 by Venkat Malladi 1.1.0 Test bug
- CLOSED
- 1
- 0
updated Apr 20, 2020
Authorship guidelines

onboarding#16 · created Mar 23, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Mar 31, 2020
Add base mask

BICF/Astrocyte/cellranger_mkfastq#39 · created Mar 20, 2020 by Gervaise Henry v2.1.5 Doing enhancement
- CLOSED
- 1
- 2
updated Jun 20, 2020
Update to Astrocyte 0.2.0

BICF/Astrocyte/chipseq_analysis#77 · created Mar 15, 2020 by Venkat Malladi 1.1.0 Test
- CLOSED
- 1
- 0
updated Mar 21, 2020

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