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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Config Lock git

BICF/Astrocyte/chipseq_analysis#81 · created Mar 30, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
updated Apr 16, 2020
Gitlab CI overridding concurrent pipelines

BICF/Astrocyte/chipseq_analysis#80 · created Mar 28, 2020 by Venkat Malladi bug confirmed critical
- CLOSED
- 1
- 5
updated Apr 16, 2020
Fix sigbus error

BICF/Astrocyte/chipseq_analysis#79 · created Mar 28, 2020 by Venkat Malladi bug critical
- CLOSED
- 1
- 2
updated Apr 16, 2020
Convert SOLID sequencing to basecall

BICF/Astrocyte/sra_pipeline#15 · created Mar 26, 2020 by Venkat Malladi Bug fixes To Do error correction
- CLOSED
- 1
- 0
updated Jun 01, 2020
Paired-end Diffbind peaks gives different answer

BICF/Astrocyte/chipseq_analysis#78 · created Mar 25, 2020 by Venkat Malladi 1.1.0 Test bug
- CLOSED
- 1
- 0
updated Apr 20, 2020
Authorship guidelines

onboarding#16 · created Mar 23, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Mar 31, 2020
Add base mask

BICF/Astrocyte/cellranger_mkfastq#39 · created Mar 20, 2020 by Gervaise Henry v2.1.5 Doing enhancement
- CLOSED
- 1
- 2
updated Jun 20, 2020
Ignore dual index

BICF/Astrocyte/cellranger_mkfastq#38 · created Mar 19, 2020 by Gervaise Henry v2.1.5 Doing critical enhancement
- CLOSED
- 1
- 1
updated Jun 20, 2020
Update to Astrocyte 0.2.0

BICF/Astrocyte/chipseq_analysis#77 · created Mar 15, 2020 by Venkat Malladi 1.1.0 Test
- CLOSED
- 1
- 0
updated Mar 21, 2020
Add ulimit to cellranger process

BICF/Astrocyte/cellranger_mkfastq#37 · created Feb 21, 2020 by Gervaise Henry v2.1.5 Doing bug confirmed critical
- CLOSED
- 1
- 1
updated Jun 20, 2020
BUG: thread error on Astrocyte

BICF/Astrocyte/cellranger_count#40 · created Feb 21, 2020 by Gervaise Henry v2.1.1 bug confirmed critical
- CLOSED
- 1
- 0
updated Apr 20, 2020
Update version of multiqc

BICF/Astrocyte/chipseq_analysis#76 · created Feb 10, 2020 by Holly Ruess 1.1.0 bug enhancement
- CLOSED
- 1
updated Mar 15, 2020
updateUnitTests

BICF/Astrocyte/sra_pipeline#14 · created Feb 06, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability To Do Updates
- CLOSED
- 1
- 1
updated Jun 17, 2020
Rename Plot profile to be consistent with naming

BICF/Astrocyte/chipseq_analysis#75 · created Feb 05, 2020 by Venkat Malladi 1.1.0 Test
- CLOSED
- 1
- 0
updated Apr 21, 2020
Make a link in redmine.md

onboarding#15 · created Jan 23, 2020 by Venkat Malladi
- CLOSED
- 1
updated Jan 24, 2020
Update to Singularity Image 2.0.0 compatability.

BICF/Astrocyte/sra_pipeline#12 · created Jan 16, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability Updates
- CLOSED
- 2
- 0
updated Feb 05, 2020
Annotate peaks

BICF/Astrocyte/atacseq_analysis#32 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jun 11, 2020
Blacklist of regions

BICF/Astrocyte/atacseq_analysis#31 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jun 09, 2020
TSS enrichment score

BICF/Astrocyte/atacseq_analysis#30 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 0
updated May 28, 2020
Add FRiP score

BICF/Astrocyte/atacseq_analysis#29 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 0
updated May 13, 2020

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