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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Add simple integration CI test

BICF/Astrocyte/cellranger_count#46 · created Apr 26, 2020 by Gervaise Henry 3.0.0 To Do enhancement
- 0
updated Nov 03, 2020
Add ability to handle dual index

BICF/Astrocyte/cellranger_mkfastq#44 · created Oct 30, 2020 by Gervaise Henry Pending To Do critical enhancement
- 4
updated Nov 03, 2020
Add output comments for untarBCL

BICF/Astrocyte/cellranger_mkfastq#43 · created Oct 29, 2020 by Gervaise Henry Pending To Do enhancement
- 1
updated Nov 03, 2020
Update multiqc version/references report

BICF/Astrocyte/cellranger_mkfastq#40 · created Jun 23, 2020 by Gervaise Henry Pending To Do documentation enhancement
- 0
updated Nov 03, 2020
Add test for astrocyte specific run of pipline 3 of 3 tasks completed

BICF/Astrocyte/cellranger_mkfastq#41 · created Jun 26, 2020 by Venkat Malladi To Do bug
- 1
- 0
updated Oct 30, 2020
Generate QC Plot

BICF/Astrocyte/cellranger_count#52 · created Sep 18, 2020 by Jeremy Mathews
- 0
updated Sep 18, 2020
Update to Astocyte 0.4.0 4 of 4 tasks completed

BICF/Astrocyte/cellranger_mkfastq#42 · created Sep 07, 2020 by Venkat Malladi To Do
- 1
- 0
updated Sep 07, 2020
File vs Channel

BICF/Astrocyte/sra_pipeline#10 · created Dec 03, 2019 by Jeremy Mathews To Do
- 1
- 3
updated Aug 27, 2020
Add flag for SAM instead of FastQ

BICF/Astrocyte/sra_pipeline#27 · created Aug 26, 2020 by Jonathan Gesell New Feature To Do Updates
- 0
updated Aug 26, 2020
Fix issue downloading and spliting for single cell data

BICF/Astrocyte/sra_pipeline#26 · created Aug 17, 2020 by Venkat Malladi Bug fixes
- 2
updated Aug 21, 2020
create down-sampled test data

BICF/Astrocyte/chipseq_analysis#88 · created Aug 07, 2020 by Spencer Barnes
- 0
updated Aug 07, 2020
Add test for astrocyte 0.3.1 0 of 3 tasks completed

BICF/Astrocyte/cellranger_count#49 · created Jun 26, 2020 by Venkat Malladi Wait bug
- 0
updated Aug 02, 2020
Shiny App 4 of 6 tasks completed

BICF/Astrocyte/cellranger_count#35 · created Jul 31, 2019 by Gervaise Henry Wait enhancement
- 1
updated Aug 02, 2020
Create output plots

BICF/Astrocyte/cellranger_count#34 · created Jul 31, 2019 by Gervaise Henry Wait enhancement
- 0
updated Aug 02, 2020
Genomics inventory

BICF/KCE/kce_etl#16 · created Jul 09, 2019 by Venkat Malladi
- 0
updated Jul 01, 2020
Update multiqc version/references report

BICF/Astrocyte/atacseq_analysis#41 · created Jun 23, 2020 by Gervaise Henry Version 2.1.0 documentation enhancment
- 1
- 0
updated Jul 01, 2020
update test for astrocyte 0.3.1

BICF/Astrocyte/sra_pipeline#25 · created Jun 26, 2020 by Venkat Malladi
- 0
updated Jun 26, 2020
map_reads failure case

BICF/Astrocyte/atacseq_analysis#1 · created Apr 12, 2018 by Spencer Barnes Version 2.1.0 bug
- 0
updated Jun 23, 2020
Motif search in peaks

BICF/Astrocyte/atacseq_analysis#33 · created Jan 09, 2020 by Holly Ruess Version 2.1.0 enhancment
- 0
updated Jun 23, 2020
Diff Peak analysis

BICF/Astrocyte/atacseq_analysis#34 · created Jan 09, 2020 by Holly Ruess Version 2.1.0 enhancment
- 0
updated Jun 23, 2020

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