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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Gender to sex

BICF/KCE/kce_etl#29 · created Jul 01, 2020 by Venkat Malladi
- CLOSED
- 1
updated Jul 01, 2020
Update to astrocyte 0.3.1

BICF/Astrocyte/atacseq_analysis#42 · created Jun 26, 2020 by Venkat Malladi Version 2.1.0
- CLOSED
- 0
updated Jul 01, 2020
Update to astrocyte 0.3.1

BICF/Astrocyte/chipseq_analysis#86 · created Jun 26, 2020 by Venkat Malladi 2.0.0
- CLOSED
- 0
updated Jul 01, 2020
Track chip-seq usage

BICF/Astrocyte/chipseq_analysis#84 · created Jun 19, 2020 by Venkat Malladi
- CLOSED
- 1
- 1
updated Jul 01, 2020
Astrocyte fixes

BICF/Astrocyte/atacseq_analysis#40 · created Jun 19, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Jun 21, 2020
Add base mask

BICF/Astrocyte/cellranger_mkfastq#39 · created Mar 20, 2020 by Gervaise Henry v2.1.5 Doing enhancement
- CLOSED
- 1
- 2
updated Jun 20, 2020
Ignore dual index

BICF/Astrocyte/cellranger_mkfastq#38 · created Mar 19, 2020 by Gervaise Henry v2.1.5 Doing critical enhancement
- CLOSED
- 1
- 1
updated Jun 20, 2020
Add ulimit to cellranger process

BICF/Astrocyte/cellranger_mkfastq#37 · created Feb 21, 2020 by Gervaise Henry v2.1.5 Doing bug confirmed critical
- CLOSED
- 1
- 1
updated Jun 20, 2020
Tests for astrocyte

BICF/Astrocyte/atacseq_analysis#39 · created Jun 11, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Jun 18, 2020
Add badges

BICF/Astrocyte/sra_pipeline#21 · created Jun 02, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Jun 17, 2020
updateUnitTests

BICF/Astrocyte/sra_pipeline#14 · created Feb 06, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability To Do Updates
- CLOSED
- 1
- 1
updated Jun 17, 2020
Annotate peaks

BICF/Astrocyte/atacseq_analysis#32 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jun 11, 2020
Blacklist of regions

BICF/Astrocyte/atacseq_analysis#31 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jun 09, 2020
Add fragment size distribution

BICF/Astrocyte/atacseq_analysis#27 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 1
updated Jun 09, 2020
Update Astrocyte configuration 4 of 8 tasks completed

BICF/Astrocyte/sra_pipeline#18 · created Apr 04, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Jun 01, 2020
BUG: Cannot handle multiple runs

BICF/Astrocyte/sra_pipeline#16 · created Apr 03, 2020 by Gervaise Henry To Do
- CLOSED
- 1
- 2
updated Jun 01, 2020
Convert SOLID sequencing to basecall

BICF/Astrocyte/sra_pipeline#15 · created Mar 26, 2020 by Venkat Malladi Bug fixes To Do error correction
- CLOSED
- 1
- 0
updated Jun 01, 2020
TSS enrichment score

BICF/Astrocyte/atacseq_analysis#30 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 0
updated May 28, 2020
Fix concurrent runners

BICF/Astrocyte/atacseq_analysis#21 · created Dec 20, 2019 by Venkat Malladi
- CLOSED
- 4
updated May 28, 2020
Add in references and version used in script

BICF/Astrocyte/atacseq_analysis#9 · created May 02, 2019 by Venkat Malladi Version 2.0 critical
- CLOSED
- 1
updated May 28, 2020

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