Skip to content

GitLab

  • Menu
Projects Groups Snippets
    • Loading...
  • Help
    • Help
    • Support
    • Community forum
    • Submit feedback
  • Sign in
  • BICF BICF
  • Group information
    • Group information
    • Activity
    • Labels
    • Members
  • Epics 0
    • Epics 0
    • List
    • Boards
    • Roadmap
  • Issues 76
    • Issues 76
    • List
    • Boards
    • Milestones
    • Iterations
  • Merge requests 3
    • Merge requests 3
  • Security & Compliance
    • Security & Compliance
    • Security dashboard
    • Vulnerability report
  • Packages & Registries
    • Packages & Registries
    • Package Registry
  • Analytics
    • Analytics
    • Insights
    • Issue
  • Wiki
    • Wiki
Collapse sidebar
  • BICF
  • Issues

  • Open 76
  • Closed 273
  • All 349
  • Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking
  • Annotate Diffbind output
    BICF/Astrocyte/chipseq_analysis#63 · created Aug 25, 2019 by Holly Ruess   2.0.0   To Do enhancement
    • 0
    updated Dec 29, 2020
  • Strip spaces in design file
    BICF/Astrocyte/chipseq_analysis#90 · created Oct 20, 2020 by Venkat Malladi   2.0.0   bug
    • 0
    updated Dec 29, 2020
  • Diffbind is tsv not csv
    BICF/Astrocyte/chipseq_analysis#89 · created Sep 07, 2020 by Venkat Malladi   2.0.0   bug
    • 0
    updated Dec 29, 2020
  • Fix README
    BICF/Astrocyte/sra_pipeline#28 · created Nov 24, 2020 by Jeremy Mathews
    • CLOSED
    • 1
    • 0
    updated Nov 25, 2020
  • Add 5GEXPE/SE as library options
    BICF/Astrocyte/cellranger_count#56 · created Nov 20, 2020 by Gervaise Henry   3.0.0   Doing critical
    • CLOSED
    • 2
    • 0
    updated Nov 20, 2020
  • Add cellranger 5.0.0
    BICF/Astrocyte/cellranger_count#55 · created Nov 20, 2020 by Gervaise Henry   3.0.0   To Do support
    • 0
    updated Nov 20, 2020
  • Upgrade to cellranger 5.0.0
    BICF/Astrocyte/cellranger_mkfastq#45 · created Nov 20, 2020 by Gervaise Henry   3.0.0   To Do
    • 0
    updated Nov 20, 2020
  • Ref 2020-A not compatible with cellrangers < 4.0.0
    BICF/Astrocyte/cellranger_count#53 · created Oct 16, 2020 by Gervaise Henry   3.0.0   To Do bug
    • 1
    updated Nov 20, 2020
  • 5GEX QC data not present in multiqc report
    BICF/Astrocyte/cellranger_count#54 · created Nov 04, 2020 by Gervaise Henry   3.0.0   To Do bug confirmed
    • 0
    updated Nov 04, 2020
  • Update multiqc version/references report
    BICF/Astrocyte/cellranger_count#48 · created Jun 23, 2020 by Gervaise Henry   3.0.0   To Do documentation enhancement
    • 0
    updated Nov 03, 2020
  • Add simple integration CI test
    BICF/Astrocyte/cellranger_count#46 · created Apr 26, 2020 by Gervaise Henry   3.0.0   To Do enhancement
    • 0
    updated Nov 03, 2020
  • Add ability to handle dual index
    BICF/Astrocyte/cellranger_mkfastq#44 · created Oct 30, 2020 by Gervaise Henry   Pending   To Do critical enhancement
    • 4
    updated Nov 03, 2020
  • Add output comments for untarBCL
    BICF/Astrocyte/cellranger_mkfastq#43 · created Oct 29, 2020 by Gervaise Henry   Pending   To Do enhancement
    • 1
    updated Nov 03, 2020
  • Update multiqc version/references report
    BICF/Astrocyte/cellranger_mkfastq#40 · created Jun 23, 2020 by Gervaise Henry   Pending   To Do documentation enhancement
    • 0
    updated Nov 03, 2020
  • Add test for astrocyte specific run of pipline   3 of 3 tasks completed
    BICF/Astrocyte/cellranger_mkfastq#41 · created Jun 26, 2020 by Venkat Malladi   To Do bug
    • 1
    • 0
    updated Oct 30, 2020
  • Update cancer gene
    BICF/KCE/kce_etl#30 · created Oct 19, 2020 by Venkat Malladi
    • CLOSED
    • 1
    • 0
    updated Oct 19, 2020
  • Generate QC Plot
    BICF/Astrocyte/cellranger_count#52 · created Sep 18, 2020 by Jeremy Mathews
    • 0
    updated Sep 18, 2020
  • Update to Astocyte 0.4.0   4 of 4 tasks completed
    BICF/Astrocyte/cellranger_mkfastq#42 · created Sep 07, 2020 by Venkat Malladi   To Do
    • 1
    • 0
    updated Sep 07, 2020
  • Update orcid Jason and Holly
    onboarding#22 · created Aug 31, 2020 by Venkat Malladi
    • CLOSED
    • 1
    • 0
    updated Aug 31, 2020
  • File vs Channel
    BICF/Astrocyte/sra_pipeline#10 · created Dec 03, 2019 by Jeremy Mathews   To Do
    • 1
    • 3
    updated Aug 27, 2020
  • Prev
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • …
  • 18
  • Next