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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Add defined output folder

BICF/Astrocyte/chipseq_analysis#22 · created Dec 26, 2018 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 0
updated Jan 06, 2019
Add DOI

BICF/Astrocyte/cellranger_count#20 · created Apr 26, 2019 by Gervaise Henry v1.1.0 Apr 29, 2019 documentation
- CLOSED
- 1
- 1
updated Aug 15, 2019
Add DOI

BICF/Astrocyte/cellranger_mkfastq#18 · created Apr 26, 2019 by Gervaise Henry v1.2.0 Apr 22, 2019 documentation
- CLOSED
- 1
- 2
updated Apr 27, 2019
Add error checking for filename/folder names

BICF/Astrocyte/cellranger_count#25 · created May 10, 2019 by Gervaise Henry v1.1.0 enhancement
- CLOSED
- 1
- 2
updated May 24, 2019
Add error checking for filename/folder names

BICF/Astrocyte/cellranger_mkfastq#22 · created May 10, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 2
- 1
updated May 21, 2019
Add Error ignore Stratagy

BICF/Astrocyte/rnaseq#18 · created Aug 27, 2019 by Jeremy Mathews
- CLOSED
- 1
- 0
updated Aug 28, 2019
Add flag for SAM instead of FastQ

BICF/Astrocyte/sra_pipeline#27 · created Aug 26, 2020 by Jonathan Gesell New Feature To Do Updates
- 0
updated Aug 26, 2020
Add fragment size distribution

BICF/Astrocyte/atacseq_analysis#27 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 1
updated Jun 09, 2020
Add FRiP score

BICF/Astrocyte/atacseq_analysis#29 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 0
updated May 13, 2020
Add human mouse mix reference v3.1.0 3 of 3 tasks completed

BICF/Astrocyte/cellranger_count#31 · created Jul 30, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 1
- 0
updated Jul 31, 2019
Add in Astrocyte Support

BICF/Astrocyte/sra_pipeline#2 · created May 03, 2019 by Venkat Malladi
- CLOSED
- 4
- 0
updated May 29, 2019
Add in blacklist

BICF/Astrocyte/chipseq_analysis#9 · created Oct 11, 2017 by Venkat Malladi 2.0.0 To Do enhancement
- 0
updated Jun 23, 2020
Add in current chip-analysis functionality.

BICF/Astrocyte/chipseq_analysis#15 · created Nov 20, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 2
- 1
updated Jan 11, 2019
Add in Fastqc

BICF/Astrocyte/chipseq_analysis#1 · created Aug 30, 2017 by Venkat Malladi rejected
- CLOSED
- 1
- 1
updated Apr 16, 2020
Add in grouping variable

BICF/Astrocyte/chipseq_analysis#10 · created Oct 11, 2017 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Oct 11, 2017
Add in Macs2 support

BICF/Astrocyte/chipseq_analysis#7 · created Oct 11, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Nov 20, 2017
Add in merge request template

BICF/Astrocyte/chipseq_analysis#51 · created May 15, 2019 by Venkat Malladi enhancement
- CLOSED
- 1
- 0
updated May 15, 2019
Add in peak call with SPP and IDR

BICF/Astrocyte/chipseq_analysis#14 · created Nov 14, 2017 by Venkat Malladi 2.0.0 To Do enhancement
- 0
updated Jun 23, 2020
Add in references and version used in script

BICF/Astrocyte/atacseq_analysis#9 · created May 02, 2019 by Venkat Malladi Version 2.0 critical
- CLOSED
- 1
updated May 28, 2020
Add in Single Cell working Group Meeting

onboarding#8 · created Sep 05, 2019 by Venkat Malladi
- CLOSED
- 0
updated Sep 05, 2019

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