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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Shiny App 4 of 6 tasks completed

BICF/Astrocyte/cellranger_count#35 · created Jul 31, 2019 by Gervaise Henry Wait enhancement
- 1
updated Aug 02, 2020
Add test for astrocyte 0.3.1 0 of 3 tasks completed

BICF/Astrocyte/cellranger_count#49 · created Jun 26, 2020 by Venkat Malladi Wait bug
- 0
updated Aug 02, 2020
Genomics inventory

BICF/KCE/kce_etl#16 · created Jul 09, 2019 by Venkat Malladi
- 0
updated Jul 01, 2020
Move params out of main.nf

BICF/Astrocyte/cellranger_mkfastq#19 · created Apr 26, 2019 by Gervaise Henry Wait enhancement
- 1
updated Apr 26, 2019
Add concatination flag

BICF/Astrocyte/sra_pipeline#19 · created Apr 30, 2020 by Jonathan Gesell Astrocyte Functionality Bug fixes Doing
- 0
updated Apr 30, 2020
Pipeline maintaince documentation

onboarding#20 · created Jun 30, 2020 by Venkat Malladi
- 0
updated Apr 06, 2021
Parallelize tests

BICF/Astrocyte/sra_pipeline#22 · created Jun 16, 2020 by Jonathan Gesell Doing Updates testing
- 0
updated Jun 16, 2020
Add tests Medication

BICF/KCE/kce_etl#24 · created Dec 12, 2019 by Venkat Malladi
- 0
updated Dec 12, 2019
Containerize Pipeline

BICF/Astrocyte/sra_pipeline#24 · created Jun 17, 2020 by Jonathan Gesell Azure Functionality Doing Updates testing
- 0
updated Jun 17, 2020
Add tests radiation

BICF/KCE/kce_etl#25 · created Dec 12, 2019 by Venkat Malladi
- 0
updated Dec 12, 2019
update test for astrocyte 0.3.1

BICF/Astrocyte/sra_pipeline#25 · created Jun 26, 2020 by Venkat Malladi
- 0
updated Jun 26, 2020
Add tests surgery

BICF/KCE/kce_etl#26 · created Jan 28, 2020 by Venkat Malladi
- 1
updated Feb 07, 2020
Fix issue downloading and spliting for single cell data

BICF/Astrocyte/sra_pipeline#26 · created Aug 17, 2020 by Venkat Malladi Bug fixes
- 2
updated Aug 21, 2020
New Beaker code

BICF/KCE/kce_etl#27 · created Apr 25, 2020 by Venkat Malladi
- 0
updated Apr 25, 2020
Add flag for SAM instead of FastQ

BICF/Astrocyte/sra_pipeline#27 · created Aug 26, 2020 by Jonathan Gesell New Feature To Do Updates
- 0
updated Aug 26, 2020
Comparison Script

BICF/KCE/kce_etl#28 · created Apr 25, 2020 by Venkat Malladi
- 0
updated Apr 25, 2020
Add cellranger 5.0.0

BICF/Astrocyte/cellranger_count#55 · created Nov 20, 2020 by Gervaise Henry 3.0.0 To Do support
- 0
updated Nov 20, 2020
5GEX QC data not present in multiqc report

BICF/Astrocyte/cellranger_count#54 · created Nov 04, 2020 by Gervaise Henry 3.0.0 To Do bug confirmed
- 0
updated Nov 04, 2020
Update multiqc version/references report

BICF/Astrocyte/cellranger_count#48 · created Jun 23, 2020 by Gervaise Henry 3.0.0 To Do documentation enhancement
- 0
updated Nov 03, 2020
Motif search in peaks

BICF/Astrocyte/atacseq_analysis#33 · created Jan 09, 2020 by Holly Ruess Version 2.1.0 enhancment
- 0
updated Jun 23, 2020

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