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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Add 5GEXPE/SE as library options

BICF/Astrocyte/cellranger_count#56 · created Nov 20, 2020 by Gervaise Henry 3.0.0 Doing critical
- CLOSED
- 2
- 0
updated Nov 20, 2020
Thread error on BioHPC

BICF/Astrocyte/cellranger_count#44 · created Apr 20, 2020 by Gervaise Henry v2.1.1 Doing To Do bug confirmed critical
- CLOSED
- 1
- 0
updated Apr 20, 2020
Ignore dual index

BICF/Astrocyte/cellranger_mkfastq#38 · created Mar 19, 2020 by Gervaise Henry v2.1.5 Doing critical enhancement
- CLOSED
- 1
- 1
updated Jun 20, 2020
Add ulimit to cellranger process

BICF/Astrocyte/cellranger_mkfastq#37 · created Feb 21, 2020 by Gervaise Henry v2.1.5 Doing bug confirmed critical
- CLOSED
- 1
- 1
updated Jun 20, 2020
BUG: thread error on Astrocyte

BICF/Astrocyte/cellranger_count#40 · created Feb 21, 2020 by Gervaise Henry v2.1.1 bug confirmed critical
- CLOSED
- 1
- 0
updated Apr 20, 2020
Add 3':5' param

BICF/Astrocyte/cellranger_count#38 · created Dec 05, 2019 by Gervaise Henry v2.1.1 Doing critical enhancement
- CLOSED
- 1
- 0
updated Apr 14, 2020
Fix astrocyte regex

BICF/Astrocyte/cellranger_mkfastq#15 · created Apr 25, 2019 by Gervaise Henry v1.1.0 bug critical
- CLOSED
- 2
- 0
updated Apr 26, 2019
Change nextflow fastq rename to iterate sample not lane

BICF/Astrocyte/cellranger_count#19 · created Mar 27, 2019 by Gervaise Henry v1.1.0 bug critical
- CLOSED
- 1
- 0
updated Apr 26, 2019
Multiqc failure

BICF/Astrocyte/cellranger_count#45 · created Apr 26, 2020 by Gervaise Henry To Do bug
- CLOSED
- 1
- 0
updated Apr 26, 2020
add checks to checkDesign process

BICF/Astrocyte/cellranger_mkfastq#34 · created Sep 11, 2019 by Spencer Barnes v2.1.5 bug enhancement
- CLOSED
- 1
- 2
updated Nov 07, 2019
Check for space in design file error

BICF/Astrocyte/cellranger_count#37 · created Sep 03, 2019 by Gervaise Henry v2.1.1 bug
- CLOSED
- 1
- 1
updated Nov 07, 2019
Design file - filename with spaces error

BICF/Astrocyte/cellranger_mkfastq#31 · created Aug 27, 2019 by Gervaise Henry v2.1.5 bug confirmed
- CLOSED
- 2
- 0
updated Sep 03, 2019
MultiQC error

BICF/Astrocyte/cellranger_count#36 · created Aug 10, 2019 by Gervaise Henry v1.2.0 bug
- CLOSED
- 1
- 0
updated Aug 13, 2019
Fix CountDesign

BICF/Astrocyte/cellranger_mkfastq#29 · created Jul 31, 2019 by Gervaise Henry v1.3.0 bug
- CLOSED
- 1
- 0
updated Aug 05, 2019
blank page on survival plot download

BICF/Astrocyte/tcga_shiny#1 · created May 20, 2019 by Spencer Barnes 1.0.1 bug
- CLOSED
- 1
- 2
updated May 22, 2019
Handle multi-flowcells in fastqc and multiqc

BICF/Astrocyte/cellranger_mkfastq#13 · created Apr 17, 2019 by Gervaise Henry v1.1.0 bug
- CLOSED
- 1
- 0
updated Apr 26, 2019
Vm's

onboarding#23 · created Apr 06, 2021 by Venkat Malladi
- CLOSED
- 1
- 0
updated Apr 06, 2021
Fix README

BICF/Astrocyte/sra_pipeline#28 · created Nov 24, 2020 by Jeremy Mathews
- CLOSED
- 1
- 0
updated Nov 25, 2020
Update cancer gene

BICF/KCE/kce_etl#30 · created Oct 19, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Oct 19, 2020
Update orcid Jason and Holly

onboarding#22 · created Aug 31, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Aug 31, 2020

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