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  • BICF
  • Issues

  • Open 76
  • Closed 273
  • All 349
  • Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking
  • An error in 'trimgalore.sh'
    BICF/Astrocyte/rnaseq#13 · created May 02, 2019 by Jeon Lee
    • 0
    updated May 02, 2019
  • Fix dea.R
    BICF/Astrocyte/rnaseq#12 · created Apr 29, 2019 by Jonathan Gesell
    • 0
    updated Apr 29, 2019
  • Add Jon's ORCID
    onboarding#3 · created Apr 29, 2019 by Venkat Malladi
    • CLOSED
    • 1
    • 0
    updated Apr 29, 2019
  • Document Backups
    onboarding#2 · created Apr 26, 2019 by Venkat Malladi
    • CLOSED
    • 1
    • 0
    updated Apr 26, 2019
  • Move params out of main.nf
    BICF/Astrocyte/cellranger_mkfastq#19 · created Apr 26, 2019 by Gervaise Henry   Wait enhancement
    • 1
    updated Apr 26, 2019
  • RNAseq-ProcessScripts
    onboarding#1 · created Apr 26, 2019 by Holly Ruess
    • CLOSED
    • 1
    • 0
    updated Apr 26, 2019
  • Trimming Comparison
    BICF/Astrocyte/atacseq_analysis#6 · created Apr 25, 2019 by Jonathan Gesell   Optimizations
    • 0
    updated Dec 29, 2020
  • Statanal fail at heatmaps
    BICF/Astrocyte/rnaseq#11 · created Apr 19, 2019 by Holly Ruess
    • CLOSED
    • 1
    • 0
    updated Apr 26, 2019
  • Merge fastq lanes
    BICF/Astrocyte/cellranger_mkfastq#5 · created Mar 28, 2019 by Gervaise Henry   suggestion
    • CLOSED
    • 1
    updated Apr 08, 2019
  • Fix process selector in config
    BICF/Astrocyte/cellranger_mkfastq#4 · created Mar 27, 2019 by Gervaise Henry   enhancement
    • CLOSED
    • 0
    updated Apr 05, 2019
  • redirect_outputs
    BICF/Astrocyte/cellranger_mkfastq#3 · created Mar 26, 2019 by Gervaise Henry   enhancement
    • CLOSED
    • 0
    updated Apr 05, 2019
  • Optimize mkfastq
    BICF/Astrocyte/cellranger_mkfastq#2 · created Mar 24, 2019 by Gervaise Henry   enhancement
    • CLOSED
    • 0
    updated Apr 05, 2019
  • Migrate cellranger_count basics
    BICF/Astrocyte/cellranger_mkfastq#1 · created Mar 24, 2019 by Gervaise Henry   enhancement
    • CLOSED
    • 0
    updated Mar 28, 2019
  • Move params out of main.nf
    BICF/Astrocyte/cellranger_count#16 · created Mar 12, 2019 by Gervaise Henry   Wait enhancement
    • 2
    updated Apr 13, 2020
  • invalid option in map_qc.py
    BICF/Astrocyte/chipseq_analysis#20 · created Dec 03, 2018 by Spencer Barnes   bug
    • CLOSED
    • 1
    updated Jan 05, 2019
  • workflow/process_scripts empty after cloning
    BICF/Astrocyte/rnaseq#10 · created Nov 02, 2018 by Holly Ruess
    • CLOSED
    • 1
    updated Nov 02, 2018
  • DEA Skip
    BICF/Astrocyte/rnaseq#9 · created May 15, 2018 by Jonathan Gesell
    • CLOSED
    • 1
    updated May 16, 2018
  • Update of RNASeq documentation and check_designfile.pl
    BICF/Astrocyte/rnaseq#8 · created May 11, 2018 by Spencer Barnes
    • 2
    updated May 16, 2018
  • Move to use Process scripts
    BICF/Astrocyte/chipseq_analysis#17 · created May 08, 2018 by Venkat Malladi   enhancement rejected
    • CLOSED
    • 1
    updated Mar 20, 2020
  • Vizapp shiny option: Implement Bookmarking for saving sessions on shiny app.
    BICF/Astrocyte/rnaseq#7 · created Apr 17, 2018 by Min Kim
    • 0
    updated Apr 17, 2018
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