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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Update of RNASeq documentation and check_designfile.pl

BICF/Astrocyte/rnaseq#8 · created May 11, 2018 by Spencer Barnes
- 2
updated May 16, 2018
pool and pseudoreplicate

BICF/Astrocyte/atacseq_analysis#4 · created May 11, 2018 by Spencer Barnes Version 2.0 critical
- CLOSED
- 1
updated Jan 02, 2020
mitochondrial chromosome reads

BICF/Astrocyte/atacseq_analysis#3 · created May 11, 2018 by Spencer Barnes Version 2.0 critical
- CLOSED
- 0
updated Jan 02, 2020
deeptools version 3 error

BICF/Astrocyte/atacseq_analysis#2 · created May 11, 2018 by Spencer Barnes Version 2.0 enhancment
- CLOSED
- 1
updated Jan 02, 2020
Move to use Process scripts

BICF/Astrocyte/chipseq_analysis#17 · created May 08, 2018 by Venkat Malladi enhancement rejected
- CLOSED
- 1
updated Mar 20, 2020
Vizapp shiny option: Implement Bookmarking for saving sessions on shiny app.

BICF/Astrocyte/rnaseq#7 · created Apr 17, 2018 by Min Kim
- 0
updated Apr 17, 2018
map_reads failure case

BICF/Astrocyte/atacseq_analysis#1 · created Apr 12, 2018 by Spencer Barnes Version 2.1.0 bug
- 0
updated Jun 23, 2020
Fix Unreplicated experiment naive overlap

BICF/Astrocyte/chipseq_analysis#16 · created Apr 10, 2018 by Venkat Malladi
- CLOSED
- 1
updated Dec 16, 2018
Genearte Signal Tracks

BICF/Astrocyte/rnaseq#6 · created Apr 10, 2018 by Venkat Malladi
- 0
updated Apr 10, 2018
Deeptools QC metics between samples

BICF/Astrocyte/rnaseq#5 · created Apr 10, 2018 by Venkat Malladi
- 0
updated Apr 10, 2018
RNASeq Pathway Analysis Mouse support

BICF/Astrocyte/rnaseq#4 · created Apr 10, 2018 by Venkat Malladi
- 0
updated Apr 10, 2018
Update RNASeq Shiny Code

BICF/Astrocyte/rnaseq#3 · created Apr 10, 2018 by Venkat Malladi
- CLOSED
- 2
- 0
updated Nov 19, 2018
RNASeq New Isoform Detection

BICF/Astrocyte/rnaseq#2 · created Apr 10, 2018 by Brandi Cantarel
- CLOSED
- 0
updated Apr 13, 2021
star broken

BICF/Astrocyte/rnaseq#1 · created Apr 03, 2018 by Spencer Barnes
- CLOSED
- 3
updated Apr 30, 2018
Add in current chip-analysis functionality.

BICF/Astrocyte/chipseq_analysis#15 · created Nov 20, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 2
- 1
updated Jan 11, 2019
Add in peak call with SPP and IDR

BICF/Astrocyte/chipseq_analysis#14 · created Nov 14, 2017 by Venkat Malladi 2.0.0 To Do enhancement
- 0
updated Jun 23, 2020
Pool and Pseudoreplication

BICF/Astrocyte/chipseq_analysis#13 · created Oct 25, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Oct 30, 2017
Make tagAlign files

BICF/Astrocyte/chipseq_analysis#12 · created Oct 18, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Oct 23, 2017
Remove qc_fastq.py

BICF/Astrocyte/chipseq_analysis#11 · created Oct 17, 2017 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Oct 18, 2017
Add in grouping variable

BICF/Astrocyte/chipseq_analysis#10 · created Oct 11, 2017 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Oct 11, 2017

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