Skip to content

GitLab

Menu

Projects Groups Snippets

Loading...
Help
Sign in / Register

BICF
Group information
- Group information
- Activity
- Labels
- Members
Epics 0
- Epics 0
- List
- Boards
- Roadmap
Issues 76
- Issues 76
- List
- Boards
- Milestones
- Iterations
Merge requests 3
- Merge requests 3
Security & Compliance
- Security & Compliance
- Security dashboard
- Vulnerability report
Packages & Registries
- Packages & Registries
- Package Registry
Analytics
- Analytics
- Insights
- Issue
Wiki
- Wiki

Collapse sidebar

BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Move params out of main.nf

BICF/Astrocyte/cellranger_count#16 · created Mar 12, 2019 by Gervaise Henry Wait enhancement
- 2
updated Apr 13, 2020
New folders for all steps

BICF/Astrocyte/chipseq_analysis#33 · created Mar 12, 2019 by Venkat Malladi 1.0.0
- CLOSED
- 1
- 0
updated Mar 16, 2019
Memory

BICF/Astrocyte/chipseq_analysis#32 · created Mar 12, 2019 by Venkat Malladi 3.0.0 discussion
- 0
updated Jun 23, 2020
Develop CI

BICF/Astrocyte/cellranger_count#14 · created Mar 11, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 1
- 2
updated Aug 15, 2019
skip motif search and diff bind

BICF/Astrocyte/chipseq_analysis#31 · created Mar 08, 2019 by Holly Ruess 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Mar 12, 2019
Add ability to count additional features

BICF/Astrocyte/cellranger_count#10 · created Mar 04, 2019 by Gervaise Henry Pending To Do enhancement
- 0
updated Jun 21, 2020
Re-direct output

BICF/Astrocyte/atacseq_analysis#5 · created Feb 20, 2019 by Holly Ruess Version 2.0 critical
- CLOSED
- 0
updated Jan 02, 2020
xcor.py, --random-source fails if file is too small

BICF/Astrocyte/chipseq_analysis#30 · created Feb 12, 2019 by Holly Ruess 1.1.0
- CLOSED
- 1
- 0
updated Mar 15, 2020
Add MultiQC

BICF/Astrocyte/cellranger_count#5 · created Feb 06, 2019 by Gervaise Henry v1.1.0 enhancement
- CLOSED
- 3
- 1
updated Aug 15, 2019
add plotProfile

BICF/Astrocyte/chipseq_analysis#29 · created Jan 23, 2019 by Holly Ruess 1.1.0 enhancement
- CLOSED
- 1
- 0
updated Mar 15, 2020
Last 3 steps don't go into user defined output directory

BICF/Astrocyte/chipseq_analysis#28 · created Jan 23, 2019 by Holly Ruess 1.0.0 bug
- CLOSED
- 0
updated Apr 03, 2019
Add Pearson correlation, and make Spearman and Pearson Corr Plots pdf

BICF/Astrocyte/chipseq_analysis#27 · created Jan 16, 2019 by Holly Ruess 1.0.0
- CLOSED
- 1
updated Jan 31, 2019
callPeaksMACS exits when data is bad

BICF/Astrocyte/chipseq_analysis#26 · created Jan 15, 2019 by Holly Ruess 1.1.0 bug
- CLOSED
- 1
- 3
updated Mar 15, 2020
experimentQC plots are empty in PE

BICF/Astrocyte/chipseq_analysis#25 · created Jan 03, 2019 by Holly Ruess 1.0.0 bug
- CLOSED
- 0
updated Jan 06, 2019
Test Astrocyte

BICF/Astrocyte/chipseq_analysis#24 · created Dec 27, 2018 by Venkat Malladi 1.0.0 critical
- CLOSED
- 1
- 0
updated Apr 21, 2019
Use SampleIds/ Experiment Id as file names throughtout pipeline

BICF/Astrocyte/chipseq_analysis#23 · created Dec 26, 2018 by Venkat Malladi 1.0.0 critical
- CLOSED
- 1
- 0
updated Mar 10, 2019
Add defined output folder

BICF/Astrocyte/chipseq_analysis#22 · created Dec 26, 2018 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 0
updated Jan 06, 2019
Output software versions and methods and references

BICF/Astrocyte/chipseq_analysis#21 · created Dec 26, 2018 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 1
updated Apr 18, 2019
invalid option in map_qc.py

BICF/Astrocyte/chipseq_analysis#20 · created Dec 03, 2018 by Spencer Barnes bug
- CLOSED
- 1
updated Jan 05, 2019
workflow/process_scripts empty after cloning

BICF/Astrocyte/rnaseq#10 · created Nov 02, 2018 by Holly Ruess
- CLOSED
- 1
updated Nov 02, 2018

Prev
1
…
12
13
14
15
16
17
18
Next