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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Remove reference genome full folder

BICF/Astrocyte/cellranger_count#2 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 1
updated Apr 27, 2019
Create output directory option

BICF/Astrocyte/cellranger_count#4 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 1
- 0
updated Apr 27, 2019
Make instructions

BICF/Astrocyte/cellranger_count#3 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) documentation
- CLOSED
- 1
- 0
updated Apr 27, 2019
Add DOI

BICF/Astrocyte/cellranger_mkfastq#18 · created Apr 26, 2019 by Gervaise Henry v1.2.0 Apr 22, 2019 documentation
- CLOSED
- 1
- 2
updated Apr 27, 2019
Document Backups

onboarding#2 · created Apr 26, 2019 by Venkat Malladi
- CLOSED
- 1
- 0
updated Apr 26, 2019
Statanal fail at heatmaps

BICF/Astrocyte/rnaseq#11 · created Apr 19, 2019 by Holly Ruess
- CLOSED
- 1
- 0
updated Apr 26, 2019
Move params out of main.nf

BICF/Astrocyte/cellranger_mkfastq#19 · created Apr 26, 2019 by Gervaise Henry Wait enhancement
- 1
updated Apr 26, 2019
Change nextflow fastq rename to iterate sample not lane

BICF/Astrocyte/cellranger_count#19 · created Mar 27, 2019 by Gervaise Henry v1.1.0 bug critical
- CLOSED
- 1
- 0
updated Apr 26, 2019
Change process selector

BICF/Astrocyte/cellranger_count#18 · created Mar 25, 2019 by Gervaise Henry v1.1.0 enhancement
- CLOSED
- 1
- 1
updated Apr 26, 2019
RNAseq-ProcessScripts

onboarding#1 · created Apr 26, 2019 by Holly Ruess
- CLOSED
- 1
- 0
updated Apr 26, 2019
Change location of multiqc config and name

BICF/Astrocyte/cellranger_mkfastq#14 · created Apr 21, 2019 by Venkat Malladi v1.1.0 suggestion
- CLOSED
- 1
- 0
updated Apr 26, 2019
Fix astrocyte regex

BICF/Astrocyte/cellranger_mkfastq#15 · created Apr 25, 2019 by Gervaise Henry v1.1.0 bug critical
- CLOSED
- 2
- 0
updated Apr 26, 2019
Handle multi-flowcells in fastqc and multiqc

BICF/Astrocyte/cellranger_mkfastq#13 · created Apr 17, 2019 by Gervaise Henry v1.1.0 bug
- CLOSED
- 1
- 0
updated Apr 26, 2019
Missing modules

BICF/Astrocyte/chipseq_analysis#38 · created Apr 23, 2019 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Apr 23, 2019
Fix software versions test

BICF/Astrocyte/chipseq_analysis#37 · created Apr 22, 2019 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Apr 22, 2019
Update Astrocyte documentation and errors

BICF/Astrocyte/chipseq_analysis#36 · created Apr 22, 2019 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Apr 22, 2019
Fix astrocyte run

BICF/Astrocyte/chipseq_analysis#35 · created Apr 22, 2019 by Venkat Malladi 1.0.0 bug
- CLOSED
- 2
- 0
updated Apr 22, 2019
Add multiqc summary of data

BICF/Astrocyte/chipseq_analysis#19 · created Aug 11, 2018 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 2
updated Apr 21, 2019
Test Astrocyte

BICF/Astrocyte/chipseq_analysis#24 · created Dec 27, 2018 by Venkat Malladi 1.0.0 critical
- CLOSED
- 1
- 0
updated Apr 21, 2019
Fix tests for software versions

BICF/Astrocyte/chipseq_analysis#34 · created Apr 19, 2019 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Apr 20, 2019

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