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  • BICF
  • Issues

  • Open 76
  • Closed 273
  • All 349
  • Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking
  • Multiqc failure
    BICF/Astrocyte/cellranger_count#45 · created Apr 26, 2020 by Gervaise Henry   To Do bug
    • CLOSED
    • 1
    • 0
    updated Apr 26, 2020
  • Add test for astrocyte specific run of pipline   3 of 3 tasks completed
    BICF/Astrocyte/cellranger_mkfastq#41 · created Jun 26, 2020 by Venkat Malladi   To Do bug
    • 1
    • 0
    updated Oct 30, 2020
  • DesignFile path not followed
    BICF/Astrocyte/chipseq_analysis#41 · created May 06, 2019 by Venkat Malladi   bug
    • CLOSED
    • 1
    • 0
    updated May 06, 2019
  • Update multiqc version/references report
    BICF/Astrocyte/atacseq_analysis#41 · created Jun 23, 2020 by Gervaise Henry   Version 2.1.0   documentation enhancment
    • 1
    • 0
    updated Jul 01, 2020
  • Add simple integration CI test
    BICF/Astrocyte/cellranger_count#46 · created Apr 26, 2020 by Gervaise Henry   3.0.0   To Do enhancement
    • 0
    updated Nov 03, 2020
  • Update to Astocyte 0.4.0   4 of 4 tasks completed
    BICF/Astrocyte/cellranger_mkfastq#42 · created Sep 07, 2020 by Venkat Malladi   To Do
    • 1
    • 0
    updated Sep 07, 2020
  • Retitle skipDiff and skipMotif
    BICF/Astrocyte/chipseq_analysis#42 · created May 07, 2019 by Venkat Malladi   1.0.4   documentation
    • CLOSED
    • 1
    • 0
    updated May 15, 2019
  • Update to astrocyte 0.3.1
    BICF/Astrocyte/atacseq_analysis#42 · created Jun 26, 2020 by Venkat Malladi   Version 2.1.0
    • CLOSED
    • 0
    updated Jul 01, 2020
  • Add ability to count additional features
    BICF/Astrocyte/cellranger_count#10 · created Mar 04, 2019 by Gervaise Henry   Pending   To Do enhancement
    • 0
    updated Jun 21, 2020
  • failure to load python module-motif search
    BICF/Astrocyte/chipseq_analysis#43 · created May 09, 2019 by Spencer Barnes   1.0.4   bug
    • CLOSED
    • 1
    • 0
    updated May 15, 2019
  • map reads fails to make bam files for long reads
    BICF/Astrocyte/atacseq_analysis#43 · created Jul 28, 2020 by Venkat Malladi   bug critical
    • CLOSED
    • 1
    • 1
    updated Jul 29, 2020
  • Generate QC Plot
    BICF/Astrocyte/cellranger_count#52 · created Sep 18, 2020 by Jeremy Mathews
    • 0
    updated Sep 18, 2020
  • Remove spaces and "weird characters" from design files
    BICF/Astrocyte/chipseq_analysis#45 · created May 10, 2019 by Holly Ruess   1.1.0   bug enhancement
    • CLOSED
    • 2
    updated Jul 30, 2019
  • Fix Astrocyte links
    BICF/Astrocyte/chipseq_analysis#46 · created May 10, 2019 by Holly Ruess   1.0.4   enhancement
    • CLOSED
    • 1
    • 1
    updated May 15, 2019
  • annotate peaks
    BICF/Astrocyte/chipseq_analysis#47 · created May 13, 2019 by Holly Ruess   1.1.0   enhancement
    • CLOSED
    • 1
    • 0
    updated Mar 20, 2020
  • Single control fails at pool_and_psuedoreplicate
    BICF/Astrocyte/chipseq_analysis#48 · created May 14, 2019 by Holly Ruess   1.0.4   bug
    • CLOSED
    • 1
    • 0
    updated May 15, 2019
  • check design file failure
    BICF/Astrocyte/chipseq_analysis#49 · created May 14, 2019 by Spencer Barnes   1.1.0   bug
    • CLOSED
    • 1
    updated May 14, 2019
  • Change Tests for Peak comparison to be greater than or equal to
    BICF/Astrocyte/chipseq_analysis#50 · created May 14, 2019 by Venkat Malladi   1.0.4   enhancement
    • CLOSED
    • 1
    • 0
    updated May 15, 2019
  • Add in merge request template
    BICF/Astrocyte/chipseq_analysis#51 · created May 15, 2019 by Venkat Malladi   enhancement
    • CLOSED
    • 1
    • 0
    updated May 15, 2019
  • Astrocyte Bug Fixes
    BICF/Astrocyte/chipseq_analysis#52 · created May 15, 2019 by Venkat Malladi   1.0.4   bug
    • CLOSED
    • 1
    • 0
    updated May 16, 2019
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