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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Multiqc failure

BICF/Astrocyte/cellranger_count#45 · created Apr 26, 2020 by Gervaise Henry To Do bug
- CLOSED
- 1
- 0
updated Apr 26, 2020
Add test for astrocyte specific run of pipline 3 of 3 tasks completed

BICF/Astrocyte/cellranger_mkfastq#41 · created Jun 26, 2020 by Venkat Malladi To Do bug
- 1
- 0
updated Oct 30, 2020
DesignFile path not followed

BICF/Astrocyte/chipseq_analysis#41 · created May 06, 2019 by Venkat Malladi bug
- CLOSED
- 1
- 0
updated May 06, 2019
Update multiqc version/references report

BICF/Astrocyte/atacseq_analysis#41 · created Jun 23, 2020 by Gervaise Henry Version 2.1.0 documentation enhancment
- 1
- 0
updated Jul 01, 2020
Add simple integration CI test

BICF/Astrocyte/cellranger_count#46 · created Apr 26, 2020 by Gervaise Henry 3.0.0 To Do enhancement
- 0
updated Nov 03, 2020
Update to Astocyte 0.4.0 4 of 4 tasks completed

BICF/Astrocyte/cellranger_mkfastq#42 · created Sep 07, 2020 by Venkat Malladi To Do
- 1
- 0
updated Sep 07, 2020
Retitle skipDiff and skipMotif

BICF/Astrocyte/chipseq_analysis#42 · created May 07, 2019 by Venkat Malladi 1.0.4 documentation
- CLOSED
- 1
- 0
updated May 15, 2019
Update to astrocyte 0.3.1

BICF/Astrocyte/atacseq_analysis#42 · created Jun 26, 2020 by Venkat Malladi Version 2.1.0
- CLOSED
- 0
updated Jul 01, 2020
Add ability to count additional features

BICF/Astrocyte/cellranger_count#10 · created Mar 04, 2019 by Gervaise Henry Pending To Do enhancement
- 0
updated Jun 21, 2020
failure to load python module-motif search

BICF/Astrocyte/chipseq_analysis#43 · created May 09, 2019 by Spencer Barnes 1.0.4 bug
- CLOSED
- 1
- 0
updated May 15, 2019
map reads fails to make bam files for long reads

BICF/Astrocyte/atacseq_analysis#43 · created Jul 28, 2020 by Venkat Malladi bug critical
- CLOSED
- 1
- 1
updated Jul 29, 2020
Generate QC Plot

BICF/Astrocyte/cellranger_count#52 · created Sep 18, 2020 by Jeremy Mathews
- 0
updated Sep 18, 2020
Remove spaces and "weird characters" from design files

BICF/Astrocyte/chipseq_analysis#45 · created May 10, 2019 by Holly Ruess 1.1.0 bug enhancement
- CLOSED
- 2
updated Jul 30, 2019
Fix Astrocyte links

BICF/Astrocyte/chipseq_analysis#46 · created May 10, 2019 by Holly Ruess 1.0.4 enhancement
- CLOSED
- 1
- 1
updated May 15, 2019
annotate peaks

BICF/Astrocyte/chipseq_analysis#47 · created May 13, 2019 by Holly Ruess 1.1.0 enhancement
- CLOSED
- 1
- 0
updated Mar 20, 2020
Single control fails at pool_and_psuedoreplicate

BICF/Astrocyte/chipseq_analysis#48 · created May 14, 2019 by Holly Ruess 1.0.4 bug
- CLOSED
- 1
- 0
updated May 15, 2019
check design file failure

BICF/Astrocyte/chipseq_analysis#49 · created May 14, 2019 by Spencer Barnes 1.1.0 bug
- CLOSED
- 1
updated May 14, 2019
Change Tests for Peak comparison to be greater than or equal to

BICF/Astrocyte/chipseq_analysis#50 · created May 14, 2019 by Venkat Malladi 1.0.4 enhancement
- CLOSED
- 1
- 0
updated May 15, 2019
Add in merge request template

BICF/Astrocyte/chipseq_analysis#51 · created May 15, 2019 by Venkat Malladi enhancement
- CLOSED
- 1
- 0
updated May 15, 2019
Astrocyte Bug Fixes

BICF/Astrocyte/chipseq_analysis#52 · created May 15, 2019 by Venkat Malladi 1.0.4 bug
- CLOSED
- 1
- 0
updated May 16, 2019

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