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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

remove legend from boxplots

BICF/Astrocyte/tcga_shiny#2 · created May 20, 2019 by Spencer Barnes 1.0.1 To Do enhancement
- CLOSED
- 2
- 0
updated May 24, 2019
Remove qc_fastq.py

BICF/Astrocyte/chipseq_analysis#11 · created Oct 17, 2017 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Oct 18, 2017
Remove Redundant Files

BICF/Astrocyte/sra_pipeline#4 · created May 15, 2019 by Jonathan Gesell error correction
- CLOSED
- 2
- 0
updated May 15, 2019
Remove reference genome full folder

BICF/Astrocyte/cellranger_count#2 · created Feb 06, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0) enhancement
- CLOSED
- 2
- 1
updated Apr 27, 2019
Remove spaces and "weird characters" from design files

BICF/Astrocyte/chipseq_analysis#45 · created May 10, 2019 by Holly Ruess 1.1.0 bug enhancement
- CLOSED
- 2
updated Jul 30, 2019
Remove spaces in input folders and files

BICF/Astrocyte/cellranger_mkfastq#21 · created May 03, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 1
updated May 24, 2019
Remove unnecessary columns from design file

BICF/Astrocyte/atacseq_analysis#12 · created Dec 03, 2019 by Holly Ruess Version 2.0
- CLOSED
- 2
- 0
updated Dec 04, 2019
Remove unnecessary files from output

BICF/Astrocyte/cellranger_count#43 · created Apr 13, 2020 by Gervaise Henry v2.1.1 Doing enhancement
- CLOSED
- 0
updated Apr 14, 2020
Rename Plot profile to be consistent with naming

BICF/Astrocyte/chipseq_analysis#75 · created Feb 05, 2020 by Venkat Malladi 1.1.0 Test
- CLOSED
- 1
- 0
updated Apr 21, 2020
Retitle skipDiff and skipMotif

BICF/Astrocyte/chipseq_analysis#42 · created May 07, 2019 by Venkat Malladi 1.0.4 documentation
- CLOSED
- 1
- 0
updated May 15, 2019
RNASeq New Isoform Detection

BICF/Astrocyte/rnaseq#2 · created Apr 10, 2018 by Brandi Cantarel
- CLOSED
- 0
updated Apr 13, 2021
RNASeq Pathway Analysis Mouse support

BICF/Astrocyte/rnaseq#4 · created Apr 10, 2018 by Venkat Malladi
- 0
updated Apr 10, 2018
RNAseq-ProcessScripts

onboarding#1 · created Apr 26, 2019 by Holly Ruess
- CLOSED
- 1
- 0
updated Apr 26, 2019
Sample ID for design file 3 of 3 tasks completed

BICF/Astrocyte/cellranger_mkfastq#32 · created Aug 27, 2019 by Gervaise Henry v2.1.5 documentation
- CLOSED
- 1
- 0
updated Sep 03, 2019
Setting singularity to PWD doesnt work in the /work directory.

BICF/Astrocyte/rnaseq#20 · created Jul 22, 2021 by Jeremy Mathews
- 0
updated Jul 22, 2021
Shift is incorrect for ATAC-seq

BICF/Astrocyte/atacseq_analysis#7 · created May 02, 2019 by Venkat Malladi Version 2.0 bug
- CLOSED
- 1
updated Jan 06, 2020
Shiny App 4 of 6 tasks completed

BICF/Astrocyte/cellranger_count#35 · created Jul 31, 2019 by Gervaise Henry Wait enhancement
- 1
updated Aug 02, 2020
Single control fails at pool_and_psuedoreplicate

BICF/Astrocyte/chipseq_analysis#48 · created May 14, 2019 by Holly Ruess 1.0.4 bug
- CLOSED
- 1
- 0
updated May 15, 2019
Single control or experiment fails at call peaks macs

BICF/Astrocyte/chipseq_analysis#58 · created Jul 02, 2019 by Holly Ruess 1.1.0 enhancement
- CLOSED
- 1
- 0
updated Mar 15, 2020
Single Rep Pool and Pseudo

BICF/Astrocyte/chipseq_analysis#73 · created Jan 07, 2020 by Venkat Malladi 1.1.1 Test bug
- CLOSED
- 1
- 0
updated Mar 24, 2020

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