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BICF
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Manual
Priority
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Updated date
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Manual
Title
Weight
Blocking
update version of nextflow
BICF/Astrocyte/atacseq_analysis#36
· created
Feb 26, 2020
by
Holly Ruess
Version 2.1.0
critical
enhancment
0
updated
Jun 23, 2020
Ref 2020-A not compatible with cellrangers < 4.0.0
BICF/Astrocyte/cellranger_count#53
· created
Oct 16, 2020
by
Gervaise Henry
3.0.0
To Do
bug
1
updated
Nov 20, 2020
AWSify
BICF/Astrocyte/cellranger_count#39
· created
Dec 23, 2019
by
Gervaise Henry
v2.1.1
Doing
enhancement
CLOSED
1
0
updated
Feb 21, 2020
Fix software versions test
BICF/Astrocyte/chipseq_analysis#37
· created
Apr 22, 2019
by
Venkat Malladi
1.0.0
bug
CLOSED
1
0
updated
Apr 22, 2019
Add ulimit to cellranger process
BICF/Astrocyte/cellranger_mkfastq#37
· created
Feb 21, 2020
by
Gervaise Henry
v2.1.5
Doing
bug
confirmed
critical
CLOSED
1
1
updated
Jun 20, 2020
Fix runners and sigbus error
BICF/Astrocyte/atacseq_analysis#37
· created
Mar 31, 2020
by
Venkat Malladi
CLOSED
1
0
updated
May 08, 2020
BUG: thread error on Astrocyte
BICF/Astrocyte/cellranger_count#40
· created
Feb 21, 2020
by
Gervaise Henry
v2.1.1
bug
confirmed
critical
CLOSED
1
0
updated
Apr 20, 2020
Ignore dual index
BICF/Astrocyte/cellranger_mkfastq#38
· created
Mar 19, 2020
by
Gervaise Henry
v2.1.5
Doing
critical
enhancement
CLOSED
1
1
updated
Jun 20, 2020
Missing modules
BICF/Astrocyte/chipseq_analysis#38
· created
Apr 23, 2019
by
Venkat Malladi
1.0.0
bug
CLOSED
1
0
updated
Apr 23, 2019
Add license
BICF/Astrocyte/atacseq_analysis#38
· created
Apr 06, 2020
by
Venkat Malladi
Version 2.0
CLOSED
1
0
updated
May 07, 2020
Remove unnecessary files from output
BICF/Astrocyte/cellranger_count#43
· created
Apr 13, 2020
by
Gervaise Henry
v2.1.1
Doing
enhancement
CLOSED
0
updated
Apr 14, 2020
Add base mask
BICF/Astrocyte/cellranger_mkfastq#39
· created
Mar 20, 2020
by
Gervaise Henry
v2.1.5
Doing
enhancement
CLOSED
1
2
updated
Jun 20, 2020
Upgrade to cellranger 5.0.0
BICF/Astrocyte/cellranger_mkfastq#45
· created
Nov 20, 2020
by
Gervaise Henry
3.0.0
To Do
0
updated
Nov 20, 2020
Add ability to handle dual index
BICF/Astrocyte/cellranger_mkfastq#44
· created
Oct 30, 2020
by
Gervaise Henry
Pending
To Do
critical
enhancement
4
updated
Nov 03, 2020
Tests for astrocyte
BICF/Astrocyte/atacseq_analysis#39
· created
Jun 11, 2020
by
Venkat Malladi
CLOSED
1
0
updated
Jun 18, 2020
Thread error on BioHPC
BICF/Astrocyte/cellranger_count#44
· created
Apr 20, 2020
by
Gervaise Henry
v2.1.1
Doing
To Do
bug
confirmed
critical
CLOSED
1
0
updated
Apr 20, 2020
Update multiqc version/references report
BICF/Astrocyte/cellranger_mkfastq#40
· created
Jun 23, 2020
by
Gervaise Henry
Pending
To Do
documentation
enhancement
0
updated
Nov 03, 2020
Add output comments for untarBCL
BICF/Astrocyte/cellranger_mkfastq#43
· created
Oct 29, 2020
by
Gervaise Henry
Pending
To Do
enhancement
1
updated
Nov 03, 2020
Astrocyte wrong design file
BICF/Astrocyte/chipseq_analysis#40
· created
May 06, 2019
by
Venkat Malladi
bug
CLOSED
1
0
updated
May 06, 2019
Astrocyte fixes
BICF/Astrocyte/atacseq_analysis#40
· created
Jun 19, 2020
by
Venkat Malladi
CLOSED
1
0
updated
Jun 21, 2020
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