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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Update script to incorrpoarte chagnes from ChiP_seq pipeline

BICF/Astrocyte/atacseq_analysis#10 · created May 02, 2019 by Venkat Malladi Version 1.0 critical
- CLOSED
- 1
updated Dec 03, 2019
Add in references and version used in script

BICF/Astrocyte/atacseq_analysis#9 · created May 02, 2019 by Venkat Malladi Version 2.0 critical
- CLOSED
- 1
updated May 28, 2020
Make ATAC-seq pipeline generalizibe for Open Chromatin

BICF/Astrocyte/atacseq_analysis#8 · created May 02, 2019 by Venkat Malladi Version 1.0 enhancment
- CLOSED
- 1
updated Dec 03, 2019
Shift is incorrect for ATAC-seq

BICF/Astrocyte/atacseq_analysis#7 · created May 02, 2019 by Venkat Malladi Version 2.0 bug
- CLOSED
- 1
updated Jan 06, 2020
Fix dea.R

BICF/Astrocyte/rnaseq#12 · created Apr 29, 2019 by Jonathan Gesell
- 0
updated Apr 29, 2019
Add Jon's ORCID

onboarding#3 · created Apr 29, 2019 by Venkat Malladi
- CLOSED
- 1
- 0
updated Apr 29, 2019
Organize output folders

BICF/Astrocyte/cellranger_count#24 · created Apr 27, 2019 by Gervaise Henry v1.1.0 enhancement
- CLOSED
- 1
- 0
updated May 03, 2019
CI: mkdir ln forcing

BICF/Astrocyte/cellranger_count#23 · created Apr 27, 2019 by Gervaise Henry v1.1.0 enhancement
- CLOSED
- 1
- 0
updated Aug 15, 2019
Document Backups

onboarding#2 · created Apr 26, 2019 by Venkat Malladi
- CLOSED
- 1
- 0
updated Apr 26, 2019
Make changelog

BICF/Astrocyte/cellranger_count#22 · created Apr 26, 2019 by Gervaise Henry v1.1.0 documentation
- CLOSED
- 1
- 0
updated Aug 15, 2019
Change regex in astrocyte yaml

BICF/Astrocyte/cellranger_count#21 · created Apr 26, 2019 by Gervaise Henry v1.1.0 enhancement
- CLOSED
- 1
- 0
updated Aug 15, 2019
CI: Make Astrocyte test only one for tag

BICF/Astrocyte/cellranger_mkfastq#20 · created Apr 26, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 1
- 0
updated May 24, 2019
Move params out of main.nf

BICF/Astrocyte/cellranger_mkfastq#19 · created Apr 26, 2019 by Gervaise Henry Wait enhancement
- 1
updated Apr 26, 2019
Add DOI

BICF/Astrocyte/cellranger_count#20 · created Apr 26, 2019 by Gervaise Henry v1.1.0 Apr 29, 2019 documentation
- CLOSED
- 1
- 1
updated Aug 15, 2019
Add DOI

BICF/Astrocyte/cellranger_mkfastq#18 · created Apr 26, 2019 by Gervaise Henry v1.2.0 Apr 22, 2019 documentation
- CLOSED
- 1
- 2
updated Apr 27, 2019
Link changelog to index.md

BICF/Astrocyte/cellranger_mkfastq#17 · created Apr 26, 2019 by Gervaise Henry v1.2.0 documentation
- CLOSED
- 1
- 0
updated May 24, 2019
RNAseq-ProcessScripts

onboarding#1 · created Apr 26, 2019 by Holly Ruess
- CLOSED
- 1
- 0
updated Apr 26, 2019
Add "." to regex for Astrocyte file input

BICF/Astrocyte/cellranger_mkfastq#16 · created Apr 25, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 1
- 1
updated May 24, 2019
Trimming Comparison

BICF/Astrocyte/atacseq_analysis#6 · created Apr 25, 2019 by Jonathan Gesell Optimizations
- 0
updated Dec 29, 2020
Optimizations

BICF/Astrocyte/chipseq_analysis#39 · created Apr 23, 2019 by Jonathan Gesell 3.0.0 discussion enhancement
- 0
updated Jun 23, 2020

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