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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Optimizations

BICF/Astrocyte/chipseq_analysis#39 · created Apr 23, 2019 by Jonathan Gesell 3.0.0 discussion enhancement
- 0
updated Jun 23, 2020
Missing modules

BICF/Astrocyte/chipseq_analysis#38 · created Apr 23, 2019 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Apr 23, 2019
Fix software versions test

BICF/Astrocyte/chipseq_analysis#37 · created Apr 22, 2019 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Apr 22, 2019
Update Astrocyte documentation and errors

BICF/Astrocyte/chipseq_analysis#36 · created Apr 22, 2019 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Apr 22, 2019
Fix astrocyte run

BICF/Astrocyte/chipseq_analysis#35 · created Apr 22, 2019 by Venkat Malladi 1.0.0 bug
- CLOSED
- 2
- 0
updated Apr 22, 2019
Change location of multiqc config and name

BICF/Astrocyte/cellranger_mkfastq#14 · created Apr 21, 2019 by Venkat Malladi v1.1.0 suggestion
- CLOSED
- 1
- 0
updated Apr 26, 2019
Statanal fail at heatmaps

BICF/Astrocyte/rnaseq#11 · created Apr 19, 2019 by Holly Ruess
- CLOSED
- 1
- 0
updated Apr 26, 2019
Fix tests for software versions

BICF/Astrocyte/chipseq_analysis#34 · created Apr 19, 2019 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Apr 20, 2019
Handle multi-flowcells in fastqc and multiqc

BICF/Astrocyte/cellranger_mkfastq#13 · created Apr 17, 2019 by Gervaise Henry v1.1.0 bug
- CLOSED
- 1
- 0
updated Apr 26, 2019
Move software version report to the bottom

BICF/Astrocyte/cellranger_mkfastq#12 · created Apr 12, 2019 by Gervaise Henry Astrocyte Production (v1.0.0) enhancement suggestion
- CLOSED
- 1
- 0
updated Apr 12, 2019
Speed up fastqc and/or multiqc

BICF/Astrocyte/cellranger_mkfastq#11 · created Apr 10, 2019 by Gervaise Henry Astrocyte Production (v1.0.0) enhancement
- CLOSED
- 0
updated Apr 12, 2019
Add references to multiqc report

BICF/Astrocyte/cellranger_mkfastq#10 · created Apr 10, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 2
- 0
updated Jul 22, 2019
Split multiqc fastqc by r1/r2/i1

BICF/Astrocyte/cellranger_mkfastq#9 · created Apr 09, 2019 by Gervaise Henry Astrocyte Production (v1.0.0) enhancement
- CLOSED
- 1
- 0
updated Apr 12, 2019
Create design file for cellranger_count pipeline

BICF/Astrocyte/cellranger_mkfastq#8 · created Apr 09, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 1
- 0
updated Jul 22, 2019
Update Documentation

BICF/Astrocyte/cellranger_mkfastq#7 · created Apr 08, 2019 by Gervaise Henry Astrocyte Production (v1.0.0) documentation
- CLOSED
- 1
- 0
updated May 24, 2019
Add MultiQC

BICF/Astrocyte/cellranger_mkfastq#6 · created Apr 05, 2019 by Gervaise Henry Astrocyte Production (v1.0.0) enhancement
- CLOSED
- 0
updated Apr 10, 2019
Merge fastq lanes

BICF/Astrocyte/cellranger_mkfastq#5 · created Mar 28, 2019 by Gervaise Henry suggestion
- CLOSED
- 1
updated Apr 08, 2019
Fix process selector in config

BICF/Astrocyte/cellranger_mkfastq#4 · created Mar 27, 2019 by Gervaise Henry enhancement
- CLOSED
- 0
updated Apr 05, 2019
Change nextflow fastq rename to iterate sample not lane

BICF/Astrocyte/cellranger_count#19 · created Mar 27, 2019 by Gervaise Henry v1.1.0 bug critical
- CLOSED
- 1
- 0
updated Apr 26, 2019
redirect_outputs

BICF/Astrocyte/cellranger_mkfastq#3 · created Mar 26, 2019 by Gervaise Henry enhancement
- CLOSED
- 0
updated Apr 05, 2019

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