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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Add Pearson correlation, and make Spearman and Pearson Corr Plots pdf

BICF/Astrocyte/chipseq_analysis#27 · created Jan 16, 2019 by Holly Ruess 1.0.0
- CLOSED
- 1
updated Jan 31, 2019
callPeaksMACS exits when data is bad

BICF/Astrocyte/chipseq_analysis#26 · created Jan 15, 2019 by Holly Ruess 1.1.0 bug
- CLOSED
- 1
- 3
updated Mar 15, 2020
experimentQC plots are empty in PE

BICF/Astrocyte/chipseq_analysis#25 · created Jan 03, 2019 by Holly Ruess 1.0.0 bug
- CLOSED
- 0
updated Jan 06, 2019
Test Astrocyte

BICF/Astrocyte/chipseq_analysis#24 · created Dec 27, 2018 by Venkat Malladi 1.0.0 critical
- CLOSED
- 1
- 0
updated Apr 21, 2019
Use SampleIds/ Experiment Id as file names throughtout pipeline

BICF/Astrocyte/chipseq_analysis#23 · created Dec 26, 2018 by Venkat Malladi 1.0.0 critical
- CLOSED
- 1
- 0
updated Mar 10, 2019
Add defined output folder

BICF/Astrocyte/chipseq_analysis#22 · created Dec 26, 2018 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 0
updated Jan 06, 2019
Output software versions and methods and references

BICF/Astrocyte/chipseq_analysis#21 · created Dec 26, 2018 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 1
updated Apr 18, 2019
invalid option in map_qc.py

BICF/Astrocyte/chipseq_analysis#20 · created Dec 03, 2018 by Spencer Barnes bug
- CLOSED
- 1
updated Jan 05, 2019
workflow/process_scripts empty after cloning

BICF/Astrocyte/rnaseq#10 · created Nov 02, 2018 by Holly Ruess
- CLOSED
- 1
updated Nov 02, 2018
Add multiqc summary of data

BICF/Astrocyte/chipseq_analysis#19 · created Aug 11, 2018 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 2
updated Apr 21, 2019
broken link in documentation

BICF/Astrocyte/chipseq_analysis#18 · created Jun 13, 2018 by Spencer Barnes 1.0.0 bug
- CLOSED
- 1
updated Jan 05, 2019
DEA Skip

BICF/Astrocyte/rnaseq#9 · created May 15, 2018 by Jonathan Gesell
- CLOSED
- 1
updated May 16, 2018
pool and pseudoreplicate

BICF/Astrocyte/atacseq_analysis#4 · created May 11, 2018 by Spencer Barnes Version 2.0 critical
- CLOSED
- 1
updated Jan 02, 2020
mitochondrial chromosome reads

BICF/Astrocyte/atacseq_analysis#3 · created May 11, 2018 by Spencer Barnes Version 2.0 critical
- CLOSED
- 0
updated Jan 02, 2020
deeptools version 3 error

BICF/Astrocyte/atacseq_analysis#2 · created May 11, 2018 by Spencer Barnes Version 2.0 enhancment
- CLOSED
- 1
updated Jan 02, 2020
Move to use Process scripts

BICF/Astrocyte/chipseq_analysis#17 · created May 08, 2018 by Venkat Malladi enhancement rejected
- CLOSED
- 1
updated Mar 20, 2020
Fix Unreplicated experiment naive overlap

BICF/Astrocyte/chipseq_analysis#16 · created Apr 10, 2018 by Venkat Malladi
- CLOSED
- 1
updated Dec 16, 2018
Update RNASeq Shiny Code

BICF/Astrocyte/rnaseq#3 · created Apr 10, 2018 by Venkat Malladi
- CLOSED
- 2
- 0
updated Nov 19, 2018
RNASeq New Isoform Detection

BICF/Astrocyte/rnaseq#2 · created Apr 10, 2018 by Brandi Cantarel
- CLOSED
- 0
updated Apr 13, 2021
star broken

BICF/Astrocyte/rnaseq#1 · created Apr 03, 2018 by Spencer Barnes
- CLOSED
- 3
updated Apr 30, 2018

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