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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Add more artifacts to CI

BICF/Astrocyte/cellranger_mkfastq#27 · created Jul 30, 2019 by Gervaise Henry v1.3.0 enhancement
- CLOSED
- 1
- 0
updated Jul 31, 2019
Change to cellranger v 3.1.0

BICF/Astrocyte/cellranger_mkfastq#26 · created Jul 30, 2019 by Gervaise Henry v1.3.0 enhancement
- CLOSED
- 1
- 0
updated Jul 31, 2019
Remove spaces and "weird characters" from design files

BICF/Astrocyte/chipseq_analysis#45 · created May 10, 2019 by Holly Ruess 1.1.0 bug enhancement
- CLOSED
- 2
updated Jul 30, 2019
Test for kitVersion=3 and version=2.1.1 and exit if true

BICF/Astrocyte/cellranger_count#29 · created Jul 23, 2019 by Gervaise Henry v1.1.0 enhancement
- CLOSED
- 1
- 0
updated Jul 23, 2019
Create design file for cellranger_count pipeline

BICF/Astrocyte/cellranger_mkfastq#8 · created Apr 09, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 1
- 0
updated Jul 22, 2019
Add pytest to CI

BICF/Astrocyte/cellranger_mkfastq#25 · created Jul 19, 2019 by Gervaise Henry v1.2.0 documentation
- CLOSED
- 1
- 0
updated Jul 22, 2019
Add references to multiqc report

BICF/Astrocyte/cellranger_mkfastq#10 · created Apr 10, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 2
- 0
updated Jul 22, 2019
add python version to multiqc process

BICF/Astrocyte/chipseq_analysis#61 · created Jul 11, 2019 by Spencer Barnes
- CLOSED
- 1
- 1
updated Jul 19, 2019
Docker Image Integration

BICF/Astrocyte/sra_pipeline#6 · created Jul 03, 2019 by Jonathan Gesell testing
- CLOSED
- 1
- 1
updated Jul 18, 2019
check style

BICF/Astrocyte/cellranger_count#27 · created Jul 10, 2019 by Holly Ruess v1.1.0 documentation
- CLOSED
- 1
- 0
updated Jul 10, 2019
Correct style

BICF/Astrocyte/cellranger_mkfastq#24 · created Jul 10, 2019 by Holly Ruess v1.2.0 documentation
- CLOSED
- 1
- 0
updated Jul 10, 2019
Fail Pipeline if less reads map to genome

BICF/Astrocyte/chipseq_analysis#55 · created May 20, 2019 by Jeremy Mathews 1.0.6 enhancement
- CLOSED
- 3
- 2
updated Jul 10, 2019
Copath All table

BICF/KCE/kce_etl#13 · created Jul 09, 2019 by Venkat Malladi
- 0
updated Jul 09, 2019
CopathMets table

BICF/KCE/kce_etl#12 · created Jul 09, 2019 by Venkat Malladi
- 0
updated Jul 09, 2019
Diagnosis TR table

BICF/KCE/kce_etl#10 · created Jul 09, 2019 by Venkat Malladi
- 0
updated Jul 09, 2019
IHC

BICF/KCE/kce_etl#7 · created Jul 09, 2019 by Venkat Malladi
- 0
updated Jul 09, 2019
update 'reference.md'

BICF/Astrocyte/chipseq_analysis#59 · created Jul 03, 2019 by Spencer Barnes Jul 3, 2019
- CLOSED
- 1
- 1
updated Jul 09, 2019
Broken citation link

BICF/Astrocyte/chipseq_analysis#57 · created Jun 24, 2019 by Holly Ruess 1.1.0 documentation
- CLOSED
- 1
- 1
updated Jul 09, 2019
CheckDesignFile process

BICF/Astrocyte/rnaseq#16 · created Jun 18, 2019 by Gervaise Henry
- CLOSED
- 1
- 1
updated Jul 08, 2019
Check file inputs

BICF/Astrocyte/rnaseq#15 · created May 29, 2019 by Jeremy Mathews
- CLOSED
- 1
- 0
updated Jul 08, 2019

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