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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

map_reads failure case

BICF/Astrocyte/atacseq_analysis#1 · created Apr 12, 2018 by Spencer Barnes Version 2.1.0 bug
- 0
updated Jun 23, 2020
Memory

BICF/Astrocyte/chipseq_analysis#32 · created Mar 12, 2019 by Venkat Malladi 3.0.0 discussion
- 0
updated Jun 23, 2020
Merge fastq lanes

BICF/Astrocyte/cellranger_mkfastq#5 · created Mar 28, 2019 by Gervaise Henry suggestion
- CLOSED
- 1
updated Apr 08, 2019
Metastasis table

BICF/KCE/kce_etl#11 · created Jul 09, 2019 by Venkat Malladi rejected
- CLOSED
- 1
updated Apr 25, 2020
Migrate cellranger_count basics

BICF/Astrocyte/cellranger_mkfastq#1 · created Mar 24, 2019 by Gervaise Henry enhancement
- CLOSED
- 0
updated Mar 28, 2019
Missing modules

BICF/Astrocyte/chipseq_analysis#38 · created Apr 23, 2019 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Apr 23, 2019
mitochondrial chromosome reads

BICF/Astrocyte/atacseq_analysis#3 · created May 11, 2018 by Spencer Barnes Version 2.0 critical
- CLOSED
- 0
updated Jan 02, 2020
Motif search in peaks

BICF/Astrocyte/atacseq_analysis#33 · created Jan 09, 2020 by Holly Ruess Version 2.1.0 enhancment
- 0
updated Jun 23, 2020
Move module load into nextflow process

BICF/Astrocyte/cellranger_count#26 · created May 21, 2019 by Gervaise Henry v1.1.0 enhancement
- CLOSED
- 2
- 0
updated May 24, 2019
Move params out of main.nf

BICF/Astrocyte/cellranger_mkfastq#19 · created Apr 26, 2019 by Gervaise Henry Wait enhancement
- 1
updated Apr 26, 2019
Move params out of main.nf

BICF/Astrocyte/cellranger_count#16 · created Mar 12, 2019 by Gervaise Henry Wait enhancement
- 2
updated Apr 13, 2020
Move software version report to the bottom

BICF/Astrocyte/cellranger_mkfastq#12 · created Apr 12, 2019 by Gervaise Henry Astrocyte Production (v1.0.0) enhancement suggestion
- CLOSED
- 1
- 0
updated Apr 12, 2019
Move to use Process scripts

BICF/Astrocyte/chipseq_analysis#17 · created May 08, 2018 by Venkat Malladi enhancement rejected
- CLOSED
- 1
updated Mar 20, 2020
Move untarBCL code into a bash script

BICF/Astrocyte/cellranger_mkfastq#23 · created May 23, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 3
- 0
updated May 24, 2019
MultiConfig

BICF/Astrocyte/sra_pipeline#11 · created Dec 03, 2019 by Jeremy Mathews
- CLOSED
- 1
updated Apr 04, 2020
MultiQC error

BICF/Astrocyte/cellranger_count#36 · created Aug 10, 2019 by Gervaise Henry v1.2.0 bug
- CLOSED
- 1
- 0
updated Aug 13, 2019
Multiqc failure

BICF/Astrocyte/cellranger_count#45 · created Apr 26, 2020 by Gervaise Henry To Do bug
- CLOSED
- 1
- 0
updated Apr 26, 2020
Need Zenodo registration

BICF/Astrocyte/sra_pipeline#17 · created Apr 03, 2020 by Gervaise Henry
- CLOSED
- 1
- 2
updated Apr 20, 2020
New Beaker code

BICF/KCE/kce_etl#27 · created Apr 25, 2020 by Venkat Malladi
- 0
updated Apr 25, 2020
New folders for all steps

BICF/Astrocyte/chipseq_analysis#33 · created Mar 12, 2019 by Venkat Malladi 1.0.0
- CLOSED
- 1
- 0
updated Mar 16, 2019

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