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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Add percent of reads - mitochondria

BICF/Astrocyte/atacseq_analysis#28 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Mar 24, 2020
Comparison Script

BICF/KCE/kce_etl#28 · created Apr 25, 2020 by Venkat Malladi
- 0
updated Apr 25, 2020
Fix README

BICF/Astrocyte/sra_pipeline#28 · created Nov 24, 2020 by Jeremy Mathews
- CLOSED
- 1
- 0
updated Nov 25, 2020
Add human mouse mix reference v3.1.0 3 of 3 tasks completed

BICF/Astrocyte/cellranger_count#31 · created Jul 30, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 1
- 0
updated Jul 31, 2019
add plotProfile

BICF/Astrocyte/chipseq_analysis#29 · created Jan 23, 2019 by Holly Ruess 1.1.0 enhancement
- CLOSED
- 1
- 0
updated Mar 15, 2020
Fix CountDesign

BICF/Astrocyte/cellranger_mkfastq#29 · created Jul 31, 2019 by Gervaise Henry v1.3.0 bug
- CLOSED
- 1
- 0
updated Aug 05, 2019
Add FRiP score

BICF/Astrocyte/atacseq_analysis#29 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 0
updated May 13, 2020
Gender to sex

BICF/KCE/kce_etl#29 · created Jul 01, 2020 by Venkat Malladi
- CLOSED
- 1
updated Jul 01, 2020
Add more artifacts to CI

BICF/Astrocyte/cellranger_count#32 · created Jul 30, 2019 by Gervaise Henry v1.2.0 enhancement
- CLOSED
- 1
- 0
updated Jul 31, 2019
xcor.py, --random-source fails if file is too small

BICF/Astrocyte/chipseq_analysis#30 · created Feb 12, 2019 by Holly Ruess 1.1.0
- CLOSED
- 1
- 0
updated Mar 15, 2020
Add multiqc output to CI artifacts

BICF/Astrocyte/cellranger_mkfastq#30 · created Aug 14, 2019 by Gervaise Henry v1.3.1 documentation
- CLOSED
- 1
updated Aug 14, 2019
TSS enrichment score

BICF/Astrocyte/atacseq_analysis#30 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 0
updated May 28, 2020
Update cancer gene

BICF/KCE/kce_etl#30 · created Oct 19, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Oct 19, 2020
Exclude changes in *.md for CI

BICF/Astrocyte/cellranger_count#33 · created Jul 31, 2019 by Gervaise Henry enhancement
- CLOSED
- 1
- 0
updated Jul 31, 2019
Generate Raw RDS file

BICF/Astrocyte/cellranger_count#50 · created Jul 31, 2020 by Venkat Malladi 2.2.0 Doing enhancement
- CLOSED
- 1
- 2
updated Aug 14, 2020
Add cellranger 5.0.0

BICF/Astrocyte/cellranger_count#55 · created Nov 20, 2020 by Gervaise Henry 3.0.0 To Do support
- 0
updated Nov 20, 2020
Add 5GEXPE/SE as library options

BICF/Astrocyte/cellranger_count#56 · created Nov 20, 2020 by Gervaise Henry 3.0.0 Doing critical
- CLOSED
- 2
- 0
updated Nov 20, 2020
5GEX QC data not present in multiqc report

BICF/Astrocyte/cellranger_count#54 · created Nov 04, 2020 by Gervaise Henry 3.0.0 To Do bug confirmed
- 0
updated Nov 04, 2020
Update multiqc version/references report

BICF/Astrocyte/cellranger_count#48 · created Jun 23, 2020 by Gervaise Henry 3.0.0 To Do documentation enhancement
- 0
updated Nov 03, 2020
skip motif search and diff bind

BICF/Astrocyte/chipseq_analysis#31 · created Mar 08, 2019 by Holly Ruess 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Mar 12, 2019

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