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BICF
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BICF
Issues

Open 76
Closed 273
All 349

Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking

Add in grouping variable

BICF/Astrocyte/chipseq_analysis#10 · created Oct 11, 2017 by Venkat Malladi 1.0.0 bug
- CLOSED
- 1
- 0
updated Oct 11, 2017
Update documentation

BICF/Astrocyte/chipseq_analysis#8 · created Oct 11, 2017 by Venkat Malladi 1.0.0 documentation enhancement
- CLOSED
- 2
- 0
updated May 06, 2019
Add in Macs2 support

BICF/Astrocyte/chipseq_analysis#7 · created Oct 11, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Nov 20, 2017
Update deeptools

BICF/Astrocyte/chipseq_analysis#6 · created Oct 11, 2017 by Venkat Malladi 1.0.0 bug enhancement
- CLOSED
- 1
- 0
updated Oct 18, 2017
Include Phantompeakqualtools step

BICF/Astrocyte/chipseq_analysis#5 · created Oct 11, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 1
updated Oct 24, 2017
Bam Stats and Filter

BICF/Astrocyte/chipseq_analysis#4 · created Oct 09, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Oct 11, 2017
Add mapping and trimming

BICF/Astrocyte/chipseq_analysis#3 · created Sep 30, 2017 by Venkat Malladi 1.0.0 enhancement
- CLOSED
- 1
- 0
updated Oct 11, 2017
Insert vizapp code

BICF/Astrocyte/chipseq_analysis#92 · created Aug 04, 2021 by Erand Smakaj bug
- 1
updated Aug 05, 2021
Setting singularity to PWD doesnt work in the /work directory.

BICF/Astrocyte/rnaseq#20 · created Jul 22, 2021 by Jeremy Mathews
- 0
updated Jul 22, 2021
non-biological reads needs renaming

BICF/Astrocyte/sra_pipeline#30 · created Jul 19, 2021 by Venkat Malladi Bug fixes error correction
- 0
updated Jul 19, 2021
Paired-end

BICF/Astrocyte/sra_pipeline#29 · created Jul 19, 2021 by Venkat Malladi Bug fixes
- 0
updated Jul 19, 2021
Vm's

onboarding#23 · created Apr 06, 2021 by Venkat Malladi
- CLOSED
- 1
- 0
updated Apr 06, 2021
Fix README

BICF/Astrocyte/sra_pipeline#28 · created Nov 24, 2020 by Jeremy Mathews
- CLOSED
- 1
- 0
updated Nov 25, 2020
Update cancer gene

BICF/KCE/kce_etl#30 · created Oct 19, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Oct 19, 2020
Generate QC Plot

BICF/Astrocyte/cellranger_count#52 · created Sep 18, 2020 by Jeremy Mathews
- 0
updated Sep 18, 2020
Update to Astocyte 0.4.0 4 of 4 tasks completed

BICF/Astrocyte/cellranger_mkfastq#42 · created Sep 07, 2020 by Venkat Malladi To Do
- 1
- 0
updated Sep 07, 2020
Update orcid Jason and Holly

onboarding#22 · created Aug 31, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Aug 31, 2020
Add flag for SAM instead of FastQ

BICF/Astrocyte/sra_pipeline#27 · created Aug 26, 2020 by Jonathan Gesell New Feature To Do Updates
- 0
updated Aug 26, 2020
Fix issue downloading and spliting for single cell data

BICF/Astrocyte/sra_pipeline#26 · created Aug 17, 2020 by Venkat Malladi Bug fixes
- 2
updated Aug 21, 2020
create down-sampled test data

BICF/Astrocyte/chipseq_analysis#88 · created Aug 07, 2020 by Spencer Barnes
- 0
updated Aug 07, 2020

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