Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
T
TFSEE
Manage
Activity
Members
Labels
Plan
Issues
0
Issue boards
Milestones
Iterations
Wiki
Requirements
Code
Merge requests
0
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Locked files
Build
Pipelines
Jobs
Pipeline schedules
Test cases
Artifacts
Deploy
Releases
Container Registry
Operate
Environments
Monitor
Incidents
Service Desk
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Code review analytics
Issue analytics
Insights
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
GCRB
TFSEE
Repository
Update histone analysis.
Venkat Malladi
authored
7 years ago
1dd72c6a
1dd72c6a9d9e23d0fb2f3051314b2decdb2fa713
Select Git revision
Branches
2
master
default
analysis_output
tfsee
Histone_TFSEE
Compare
History
Find file
Code
Clone with SSH
Clone with HTTPS
Open in your IDE
Visual Studio Code (SSH)
Visual Studio Code (HTTPS)
IntelliJ IDEA (SSH)
IntelliJ IDEA (HTTPS)
Download source code
zip
tar.gz
tar.bz2
tar
Download this directory
zip
tar.gz
tar.bz2
tar
Select Archive Format
Download source code
zip
tar.gz
tar.bz2
tar
Copy HTTPS clone URL
Copy SSH clone URL
git@git.biohpc.swmed.edu:gcrb/tfsee.git
Copy HTTPS clone URL
https://git.biohpc.swmed.edu/gcrb/tfsee.git
Forked from
Venkat Malladi / TFSEE
20 commits behind
the upstream repository.
Name
Last commit
Last update
..
H3K27ac_filtered_peaks.bed
H3K27ac_filtered_peaks.tsv
H3K4me1_filtered_peaks.bed
H3K4me1_filtered_peaks.tsv
Histone_pe_filtered_peaks.bed
Input_filtered_peaks.bed
Input_filtered_peaks.tsv
box_plot_cluster_1.png
box_plot_cluster_1_tfs_fpkm.png
box_plot_cluster_2.png
box_plot_cluster_3.png
box_plot_cluster_3_tfs_fpkm.png
cluster1_enriched_tfs.png
cluster3_enriched_tfs.png
cluster_1_tfs.csv
cluster_3_tfs.csv
clustering_tfs.csv
final_full_cluster_heatmap.png
final_full_cluster_z_score.csv
find_the_clusters.py
h3k27ac_list.csv
h3k4me1_list.csv
input_list.csv
k_means_clustering.png
k_means_clustering_pca.png
matrix_analysis.py
mem_awk_script.sh
rank_order.py
rna.tsv
rpkm.py
test.bed
tfsee_processing.sh