Commits · master · GCRB / gro-seq-pipeline

09 Aug, 2016 1 commit
- Updated how transcripts are pooled. · cd6f5178
  Venkat Malladi authored Aug 09, 2016
  
  cd6f5178
01 Aug, 2016 2 commits
- Update bwa. · ea3a4f25
  Venkat Malladi authored Aug 01, 2016
  
  ea3a4f25
- Fix syntax. · f723b9dc
  Venkat Malladi authored Aug 01, 2016
  
  f723b9dc
05 Jul, 2016 1 commit
- Fix syntax. · 3c1432f8
  Venkat Malladi authored Jul 05, 2016
  
  3c1432f8
30 Jun, 2016 1 commit
- Fix paired end. · eb3f983b
  Venkat Malladi authored Jun 30, 2016
  
  eb3f983b
29 Jun, 2016 1 commit
- Fix permissions. · ced14f21
  Venkat Malladi authored Jun 29, 2016
  
  ced14f21
09 Jun, 2016 1 commit
- Added in paired end mapping. · 862091c5
  Venkat Malladi authored Jun 09, 2016
  
  862091c5
12 Apr, 2016 1 commit
- Add in rDNA. · 9f20670b
  Venkat Malladi authored Apr 12, 2016
  
  9f20670b
08 Apr, 2016 1 commit
- Add in spike-in. · 0f583998
  Venkat Malladi authored Apr 08, 2016
  
  0f583998
31 Mar, 2016 1 commit
- Fix the syntax of mouse known genes. · bd6744b0
  Venkat Malladi authored Mar 31, 2016
  
  bd6744b0
03 Mar, 2016 6 commits
- updated readme. · a3f2d45a
  Venkat Malladi authored Mar 03, 2016
  
  a3f2d45a
- Fix nargs. · cfb1c10c
  Venkat Malladi authored Mar 03, 2016
  
  cfb1c10c
- Change to args parse. · 6c7203e7
  Venkat Malladi authored Mar 03, 2016
  
  6c7203e7
- Change variable names. · ace786f2
  Venkat Malladi authored Mar 03, 2016
  
  ace786f2
- Remove prefix. · cca95362
  Venkat Malladi authored Mar 03, 2016
  
  cca95362
- Fixed option list. · 582b8be9
  Venkat Malladi authored Mar 03, 2016
  
  582b8be9
17 Feb, 2016 1 commit
- Set back to 1 core. · a47546fb
  Venkat Malladi authored Feb 17, 2016
  
  a47546fb
09 Feb, 2016 1 commit
- Remove echo. · add18616
  Venkat Malladi authored Feb 09, 2016
  
  add18616
08 Feb, 2016 7 commits
- Fix output directory. · e5c627f8
  Venkat Malladi authored Feb 08, 2016
  
  e5c627f8
- Add in missing library. · 02bd2e78
  Venkat Malladi authored Feb 08, 2016
  
  02bd2e78
- Remove plot. · 43e0a771
  Venkat Malladi authored Feb 08, 2016
  
  43e0a771
- Fix png output. · cb5f792f
  Venkat Malladi authored Feb 08, 2016
  
  cb5f792f
- Updated script from jpeg to png. · d54d53ab
  Venkat Malladi authored Feb 08, 2016
  
  d54d53ab
- Fix error in R script. · fa188711
  Venkat Malladi authored Feb 08, 2016
  
  fa188711
- Adding headers to output. · 7e8752e2
  Venkat Malladi authored Feb 08, 2016
  
  7e8752e2
05 Feb, 2016 3 commits
- Fix typo in calling R scripts. · e900672c
  Venkat Malladi authored Feb 05, 2016
  
  e900672c
- Fix typo. · a27a7764
  Venkat Malladi authored Feb 05, 2016
  
  a27a7764
- Update the cores. · 75c1f32a
  Venkat Malladi authored Feb 05, 2016
  
  75c1f32a
04 Feb, 2016 1 commit
- Updated executabel status. · da0e4e6a
  Venkat Malladi authored Feb 04, 2016
  
  da0e4e6a
03 Feb, 2016 4 commits
- updated scripts to be for timecourse. · dec3d7c9
  Venkat Malladi authored Feb 03, 2016
  
  dec3d7c9
- Fix typo. · eb4636c8
  Venkat Malladi authored Feb 03, 2016
  
  eb4636c8
- Fix typo in help. · 841798ed
  Venkat Malladi authored Feb 03, 2016
  
  841798ed
- Updated scripts and steps. · 2efdbaa8
  Venkat Malladi authored Feb 03, 2016
  
  2efdbaa8
21 Jan, 2016 1 commit
- Fix cutadapt. · a46732c7
  Venkat Malladi authored Jan 21, 2016
  
  a46732c7
20 Jan, 2016 1 commit
- Fix error message. · 20d7a4c2
  Venkat Malladi authored Jan 20, 2016
  
  20d7a4c2
14 Jan, 2016 1 commit
- Fix script. · 9d595216
  Venkat Malladi authored Jan 14, 2016
  
  9d595216
12 Jan, 2016 4 commits
- Fix lapply · baa1ff93
  Venkat Malladi authored Jan 12, 2016
  
  baa1ff93
- Update mc.cores. · caa31648
  Venkat Malladi authored Jan 12, 2016
  
  caa31648
- Fix differening rows. · 87fc6eb1
  Venkat Malladi authored Jan 12, 2016
  
  87fc6eb1
- Update order of operations. · 57c5a7c8
  Venkat Malladi authored Jan 12, 2016
  
  57c5a7c8