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Strand Lab / sc-TissueMapper_Pr
MIT LicenseUpdated -
Strand Lab / sc-TissueMapper
MIT LicenseUpdated -
GUDMAP_RBK / scRNA-seq_imgen
MIT LicenseUpdated -
CRI / Morrison Lab / scRNASeq
GNU Affero General Public License v3.0A single-cell RNA-seq analysis workflow for data stored on the BioHPC using CellRanger and Seurat.
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A repository for code to replicate the analysis of single cell data from female human urethra.
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This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.
Topics: RNASeq NGSUpdated -
This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.
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This is the conversion of the BICF RNASeq pipeline into the nextflow framework.
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GUDMAP_RBK / RNA-seq
MIT LicenseUpdated -
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This is a set of python and R routines for converting imaging and mask information to radiomic features and perform simple classification task.
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BioHPC / pyslurm
GNU General Public License v2.0 or laterPySlurm with fixes on the 16.05.5 branch to allow use with Python 3.6+
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Move Flywheel data to box.com
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Astrocyte / Workflows / BICF / process_scripts
MIT LicenseUpdated -
NGS CLIA Lab / process_scripts
MIT LicenseUpdated