Explore projects
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Astrocyte / Workflows / Strand Lab / cellxgene
MIT LicenseAn Astrocyte workflow for interactive visualization and exploration of single cell data using CZ CELLxGENE.
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Amritha Achuthkumar / chipseq_analysis
MIT LicenseUpdated -
Astrocyte / Workflows / BICF / chipseq_analysis
MIT LicenseUpdated -
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Felix Perez / chipseq_analysis_containerized
MIT LicenseUpdated -
cutandrun pipeline from https://github.com/nf-core/cutandrun
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GCRB / gcrb_atacseq_web
OtherAn example of ATAC-seq using BioHPC Astrocyte workflow engine.
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BICF / Astrocyte / methylation_analysis
MIT LicenseUpdated -
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GUDMAP_RBK / RNA-seq
MIT LicenseUpdated -
This is the conversion of the BICF RNASeq pipeline into the nextflow framework.
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This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.
Topics: RNASeq NGSUpdated -
This project is the astrocyte project to do variant analysis with BAMs generated in the RNASeq Differential expression analysis pipeline.
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A general purpose Astrocyte workflow to run quality control on single cell RNA sequencing data.
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GUDMAP_RBK / scRNA-seq_imgen
MIT LicenseUpdated -
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