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TAD aware Regulatory Network Construction (TReNCo). The package provides scripts for constructing cell-type specific mouse TF-gene networks.

De novo circular RNA detection from circular viral genome

Multiple Fisher's exact tests for differential alternative splicing detection using RNA-seq data

BioHPC Singularity tree with non-core patches

Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies

Scan Singularity container images using a Clair server

Quick and dirty singularity bootstrap definitions for all biocontainers.

An example of ATAC-seq using BioHPC Astrocyte workflow engine.

Parameter exploration job runner for the BioHPC nucleus cluster.

An example workflow package for the BioHPC Astrocyte workflow engine.