Commit dea9d7a4 authored by Devin OKelly's avatar Devin OKelly
Browse files

Update .gitlab-ci.yml

parent 440b6ad1
......@@ -50,7 +50,8 @@ nextflow_test:
script:
- module load nextflow/20.01.0
- module load singularity/3.5.3
- nextflow -C $CI_PROJECT_DIR/workflow/configs/biohpc.config run $CI_PROJECT_DIR/main.nf -with-trace -with-timeline -resume --verbose
- cd $CI_PROJECT_DIR/workflow
- nextflow -C $CI_PROJECT_DIR/workflow/configs/biohpc.config run main.nf -with-trace -with-timeline -resume --verbose
# This runs the workflow with test data and does a simple
# check for the expected output file
......
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