Commit 7b8661ac authored by Devin OKelly's avatar Devin OKelly
Browse files

Modify main.nf with instrumentation, remove params flag from astrocyte_cli

parent 44661ac3
......@@ -71,7 +71,7 @@ astrocyte_test:
extends: .astrocyte
stage: test
script:
- astrocyte_cli test "$CI_PROJECT_DIR" --verbose --param=verbose,true
- astrocyte_cli test "$CI_PROJECT_DIR" --verbose
- test -s "$CI_PROJECT_DIR/workflow/output/mobydick.txt.uppercase.tolines.wordcount"
# This runs the workflow, opting to use Docker containers.
......
......@@ -37,7 +37,9 @@ process parameters {
echo "test_string: ${params.test_string}"
echo "test_select: ${params.test_select}"
echo "test_multiselect: ${params.test_multiselect}"
pwd
whoami
env
"""
}
......
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