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BioHPC
astrocyte_example_wordcount
Commits
62d6a335
Commit
62d6a335
authored
Jun 08, 2021
by
Devin OKelly
Browse files
Update astrocyte_cli to take Options, remove NXF_DEBUG
parent
cbe7e6e4
Changes
1
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.gitlab-ci.yml
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62d6a335
...
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@@ -26,8 +26,6 @@ variables:
before_script
:
-
*all-script-before
-
module load astrocyte/0.4.0
-
NXF_DEBUG=3
-
export NXF_DEBUG
tags
:
-
cluster_node
...
...
@@ -79,7 +77,7 @@ astrocyte_test:
extends
:
.astrocyte
stage
:
test
script
:
-
astrocyte_cli test "$CI_PROJECT_DIR"
-
astrocyte_cli test "$CI_PROJECT_DIR"
--option=bg
-
test -s "$CI_PROJECT_DIR/workflow/output/mobydick.txt.uppercase.tolines.wordcount"
artifacts
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